1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU3Hr1G068650.8

HORVU3Hr1G068650.8


Description : subfamily ABCB transporter


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G068650.8
Cluster HCAA Clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
123915 No alias P-glycoprotein 11 0.02 Orthogroups_2024-Update
A4A49_00814 No alias abc transporter b family member 4 0.02 Orthogroups_2024-Update
Bradi2g47337 No alias ATP binding cassette subfamily B4 0.03 Orthogroups_2024-Update
Brara.G01961.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Brara.I00320.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
GRMZM5G833207 No alias ATP binding cassette subfamily B4 0.02 Orthogroups_2024-Update
LOC_Os04g38570 No alias multidrug resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g47490 No alias MDR-like ABC transporter, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g47500 No alias MDR-like ABC transporter, putative, expressed 0.02 Orthogroups_2024-Update
MA_10431815g0020 No alias (at3g28860 : 1752.0) Belongs to the family of... 0.06 Orthogroups_2024-Update
MA_929827g0010 No alias (at3g28345 : 1021.0) ABC transporter family protein;... 0.03 Orthogroups_2024-Update
PSME_00016535-RA No alias (at3g28860 : 1775.0) Belongs to the family of... 0.03 Orthogroups_2024-Update
PSME_00017831-RA No alias (at2g47000 : 822.0) Multidrug resistance P-glycoprotein... 0.02 Orthogroups_2024-Update
PSME_00024064-RA No alias (at3g28345 : 1431.0) ABC transporter family protein;... 0.02 Orthogroups_2024-Update
PSME_00027754-RA No alias (at2g47000 : 1521.0) Multidrug resistance ... 0.02 Orthogroups_2024-Update
Potri.010G003000 No alias ATP binding cassette subfamily B4 0.03 Orthogroups_2024-Update
Potri.014G113500 No alias P-glycoprotein 21 0.03 Orthogroups_2024-Update
Seita.2G374400.1 No alias subfamily ABCB transporter 0.04 Orthogroups_2024-Update
Seita.5G031800.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Seita.5G282700.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Seita.5G283600.1 No alias subfamily ABCB transporter 0.04 Orthogroups_2024-Update
Sobic.004G073400.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Solyc06g009290 No alias ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR) 0.03 Orthogroups_2024-Update
Solyc12g098840 No alias ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR) 0.02 Orthogroups_2024-Update
Sopen09g003060 No alias ABC transporter transmembrane region 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 123 306
IPR011527 ABC1_TM_dom 670 939
IPR003439 ABC_transporter-like 1011 1160
IPR003439 ABC_transporter-like 380 529
No external refs found!