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  5. HORVU3Hr1G071530.1

HORVU3Hr1G071530.1


Description : component *(uL13c) of large plastid ribosomal-subunit proteome


Gene families : OG_42_0005662 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005662_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Hordeum vulgare: HORVU3Hr1G071530.1
Cluster HCAA Clusters: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
7665 No alias Ribosomal protein L13 family protein 0.06 Orthogroups_2024-Update
A4A49_20292 No alias 50s ribosomal protein l13, chloroplastic 0.06 Orthogroups_2024-Update
Bradi2g49850 No alias Ribosomal protein L13 family protein 0.08 Orthogroups_2024-Update
Brara.B02333.1 No alias component *(uL13c) of large plastid ribosomal-subunit proteome 0.08 Orthogroups_2024-Update
Brara.G03600.1 No alias component *(uL13c) of large plastid ribosomal-subunit proteome 0.14 Orthogroups_2024-Update
Cre06.g264350 No alias Ribosomal protein L13 family protein 0.18 Orthogroups_2024-Update
GRMZM2G043212 No alias Ribosomal protein L13 family protein 0.03 Orthogroups_2024-Update
Glyma.15G209000 No alias Ribosomal protein L13 family protein 0.05 Orthogroups_2024-Update
Kfl00255_0080 kfl00255_0080_v1.1 (at1g78630 : 240.0) embryo defective 1473 (emb1473);... 0.09 Orthogroups_2024-Update
LOC_Os01g54540 No alias ribosomal protein L13, putative, expressed 0.06 Orthogroups_2024-Update
MA_10433400g0010 No alias (at1g78630 : 164.0) embryo defective 1473 (emb1473);... 0.1 Orthogroups_2024-Update
Potri.011G106100 No alias Ribosomal protein L13 family protein 0.04 Orthogroups_2024-Update
Pp1s152_173V6 No alias 50s ribosomal protein l13 0.03 Orthogroups_2024-Update
Pp1s365_36V6 No alias ribosomal protein l13 0.09 Orthogroups_2024-Update
Seita.5G318200.1 No alias component *(uL13c) of large plastid ribosomal-subunit proteome 0.13 Orthogroups_2024-Update
Sobic.003G295800.1 No alias component *(uL13c) of large plastid ribosomal-subunit proteome 0.11 Orthogroups_2024-Update
Solyc07g062190 No alias Ribosomal protein L13 family protein (AHRD V3.3 *** AT1G78630.1) 0.02 Orthogroups_2024-Update
Solyc12g014390 No alias Non-LTR retroelement reverse transcriptase-like protein,... 0.07 Orthogroups_2024-Update
Sopen12g006160 No alias Ribosomal protein L13 0.03 Orthogroups_2024-Update
evm.model.tig00020912.24 No alias (at1g78630 : 99.8) embryo defective 1473 (emb1473);... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004109 coproporphyrinogen oxidase activity IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 140 258
No external refs found!