Description : component *(bL34c) of large plastid ribosomal-subunit proteome
Gene families : OG_42_0007337 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007337_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Hordeum vulgare: HORVU3Hr1G078780.2 | |
Cluster | HCAA Clusters: Cluster_45 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_33698 | No alias | 50s ribosomal protein l34, chloroplastic | 0.07 | Orthogroups_2024-Update | |
Bradi2g41560 | No alias | Ribosomal protein L34 | 0.15 | Orthogroups_2024-Update | |
Bradi2g52710 | No alias | Ribosomal protein L34 | 0.12 | Orthogroups_2024-Update | |
Brara.H01969.1 | No alias | component *(bL34c) of large plastid ribosomal-subunit proteome | 0.06 | Orthogroups_2024-Update | |
Brara.I02922.1 | No alias | component *(bL34c) of large plastid ribosomal-subunit proteome | 0.04 | Orthogroups_2024-Update | |
Cre01.g030050 | No alias | Ribosomal protein L34 | 0.16 | Orthogroups_2024-Update | |
Glyma.13G230600 | No alias | Ribosomal protein L34 | 0.06 | Orthogroups_2024-Update | |
Glyma.15G082000 | No alias | Ribosomal protein L34 | 0.13 | Orthogroups_2024-Update | |
Kfl00083_0050 | kfl00083_0050_v1.1 | no hits & (original description: no original description) | 0.07 | Orthogroups_2024-Update | |
LOC_Os01g59060 | No alias | 50S ribosomal protein, putative, expressed | 0.05 | Orthogroups_2024-Update | |
MA_10435644g0010 | No alias | no hits & (original description: no original description) | 0.05 | Orthogroups_2024-Update | |
Potri.011G064800 | No alias | Ribosomal protein L34 | 0.1 | Orthogroups_2024-Update | |
Pp1s27_326V6 | No alias | 50s ribosomal protein l34 | 0.13 | Orthogroups_2024-Update | |
Seita.5G352400.1 | No alias | component *(bL34c) of large plastid ribosomal-subunit proteome | 0.07 | Orthogroups_2024-Update | |
Sobic.003G328000.1 | No alias | component *(bL34c) of large plastid ribosomal-subunit proteome | 0.14 | Orthogroups_2024-Update | |
Solyc01g056780 | No alias | 50S ribosomal protein L34 (AHRD V3.3 *** W9QWL4_9ROSA) | 0.03 | Orthogroups_2024-Update | |
Sopen01g025250 | No alias | Ribosomal protein L34 | 0.09 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | 16Dec |
CC | GO:0005840 | ribosome | IEA | 16Dec |
BP | GO:0006412 | translation | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0004109 | coproporphyrinogen oxidase activity | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006457 | protein folding | IEP | Predicted GO |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Predicted GO |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Predicted GO |
BP | GO:0016485 | protein processing | IEP | Predicted GO |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Predicted GO |
MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
CC | GO:0019898 | extrinsic component of membrane | IEP | Predicted GO |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Predicted GO |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Predicted GO |
BP | GO:0051604 | protein maturation | IEP | Predicted GO |
BP | GO:0071586 | CAAX-box protein processing | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000271 | Ribosomal_L34 | 125 | 156 |
No external refs found! |