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Description : Unknown function
Gene families : OG_42_0002384 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002384_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU3Hr1G083830.1 | |
| Cluster | HCAA Clusters: Cluster_26 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi1g20440 | No alias | chloroplast RNA-binding protein 29 | 0.04 | Orthogroups_2024-Update | |
| Bradi1g61250 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G068715 | No alias | chloroplast RNA-binding protein 29 | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G158835 | No alias | chloroplast RNA-binding protein 29 | 0.03 | Orthogroups_2024-Update | |
| Potri.006G127200 | No alias | chloroplast RNA-binding protein 29 | 0.07 | Orthogroups_2024-Update | |
| Potri.016G090700 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.04 | Orthogroups_2024-Update | |
| Pp1s260_6V6 | No alias | 29 kDa ribonucleoprotein A, chloroplast precursor... | 0.02 | Orthogroups_2024-Update | |
| Seita.2G401700.1 | No alias | plastidial ribonucleoprotein *(CP29) | 0.05 | Orthogroups_2024-Update | |
| Seita.9G387200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G357200.1 | No alias | plastidial ribonucleoprotein *(CP29) | 0.04 | Orthogroups_2024-Update | |
| Solyc09g007850 | No alias | RNA binding protein (AHRD V3.3 *** Q39209_ARATH) | 0.02 | Orthogroups_2024-Update | |
| Solyc10g086150 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD... | 0.03 | Orthogroups_2024-Update | |
| Sopen09g002690 | No alias | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 0.05 | Orthogroups_2024-Update | |
| Sopen10g035530 | No alias | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
| MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Predicted GO |
| MF | GO:0004347 | glucose-6-phosphate isomerase activity | IEP | Predicted GO |
| MF | GO:0004645 | phosphorylase activity | IEP | Predicted GO |
| MF | GO:0004664 | prephenate dehydratase activity | IEP | Predicted GO |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
| BP | GO:0006006 | glucose metabolic process | IEP | Predicted GO |
| BP | GO:0006094 | gluconeogenesis | IEP | Predicted GO |
| BP | GO:0006450 | regulation of translational fidelity | IEP | Predicted GO |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0006558 | L-phenylalanine metabolic process | IEP | Predicted GO |
| BP | GO:0006766 | vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0006772 | thiamine metabolic process | IEP | Predicted GO |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006787 | porphyrin-containing compound catabolic process | IEP | Predicted GO |
| MF | GO:0008184 | glycogen phosphorylase activity | IEP | Predicted GO |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Predicted GO |
| BP | GO:0009094 | L-phenylalanine biosynthetic process | IEP | Predicted GO |
| BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Predicted GO |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Predicted GO |
| BP | GO:0009228 | thiamine biosynthetic process | IEP | Predicted GO |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
| BP | GO:0015994 | chlorophyll metabolic process | IEP | Predicted GO |
| BP | GO:0015996 | chlorophyll catabolic process | IEP | Predicted GO |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Predicted GO |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016853 | isomerase activity | IEP | Predicted GO |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Predicted GO |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Predicted GO |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Predicted GO |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Predicted GO |
| BP | GO:0017144 | drug metabolic process | IEP | Predicted GO |
| BP | GO:0019318 | hexose metabolic process | IEP | Predicted GO |
| BP | GO:0019319 | hexose biosynthetic process | IEP | Predicted GO |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Predicted GO |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Predicted GO |
| BP | GO:0033015 | tetrapyrrole catabolic process | IEP | Predicted GO |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predicted GO |
| BP | GO:0042440 | pigment metabolic process | IEP | Predicted GO |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Predicted GO |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0046149 | pigment catabolic process | IEP | Predicted GO |
| BP | GO:0046364 | monosaccharide biosynthetic process | IEP | Predicted GO |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Predicted GO |
| MF | GO:0047746 | chlorophyllase activity | IEP | Predicted GO |
| BP | GO:0051186 | cofactor metabolic process | IEP | Predicted GO |
| BP | GO:0051187 | cofactor catabolic process | IEP | Predicted GO |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Predicted GO |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Predicted GO |
| BP | GO:1902221 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process | IEP | Predicted GO |
| BP | GO:1902223 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |