At3g10500

Description : NAC domain-containing protein 53 [Source:UniProtKB/Swiss-Prot;Acc:Q949N0]

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At3g10500
Cluster	HCCA clusters: Cluster_135

Target	Alias	Description	ECC score	Gene Family Method
At1g62700	No alias	NAC domain-containing protein 26...	0.05	Orthogroups_2024-Update
At5g61430	No alias	NAC domain-containing protein 100...	0.05	Orthogroups_2024-Update
Bradi1g63630	No alias	Arabidopsis NAC domain containing protein 87	0.03	Orthogroups_2024-Update
Brara.B01408.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E02420.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F03105.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G092465	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
GRMZM2G354151	No alias	NAC 007	0.04	Orthogroups_2024-Update
Glyma.01G167900	No alias	vascular related NAC-domain protein 1	0.06	Orthogroups_2024-Update
HORVU2Hr1G017370.4	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
HORVU2Hr1G017380.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
HORVU2Hr1G080460.8	No alias	NAC-type transcription factor	0.05	Orthogroups_2024-Update
HORVU5Hr1G045640.7	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
HORVU7Hr1G075550.1	No alias	NAC-type transcription factor & transcriptional...	0.03	Orthogroups_2024-Update
MA_15204g0010	No alias	(at3g03200 : 250.0) NAC domain containing protein 45...	0.03	Orthogroups_2024-Update
PSME_00004284-RA	No alias	(at4g10350 : 304.0) NAC domain protein. SMB, BRN1, and...	0.03	Orthogroups_2024-Update
PSME_00009079-RA	No alias	(at1g65910 : 290.0) NAC domain containing protein 28...	0.04	Orthogroups_2024-Update
PSME_00055994-RA	No alias	(at1g65910 : 249.0) NAC domain containing protein 28...	0.03	Orthogroups_2024-Update
Potri.001G144400	No alias	NAC domain containing protein 96	0.03	Orthogroups_2024-Update
Potri.009G161300	No alias	NTM1-like 8	0.03	Orthogroups_2024-Update
Potri.012G001400	No alias	NAC domain containing protein 100	0.03	Orthogroups_2024-Update
Seita.7G124900.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Solyc07g062840	No alias	goblet	0.03	Orthogroups_2024-Update
Sopen02g032870	No alias	No apical meristem (NAM) protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005787	signal peptidase complex	IEP	Predicted GO
BP	GO:0006465	signal peptide processing	IEP	Predicted GO
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	Predicted GO
MF	GO:0008171	O-methyltransferase activity	IEP	Predicted GO
MF	GO:0008417	fucosyltransferase activity	IEP	Predicted GO
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015696	ammonium transport	IEP	Predicted GO
BP	GO:0016485	protein processing	IEP	Predicted GO
BP	GO:0019538	protein metabolic process	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	Predicted GO
BP	GO:0042546	cell wall biogenesis	IEP	Predicted GO
BP	GO:0044085	cellular component biogenesis	IEP	Predicted GO
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predicted GO
BP	GO:0044267	cellular protein metabolic process	IEP	Predicted GO
BP	GO:0051604	protein maturation	IEP	Predicted GO
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predicted GO
CC	GO:1905368	peptidase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	11	136

External Links

No external refs found!

At3g10500

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation