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At3g13062


Description : At3g13062 [Source:UniProtKB/TrEMBL;Acc:B9UY99]


Gene families : OG_42_0006409 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006409_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g13062
Cluster HCCA clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
At1g55960 No alias Polyketide cyclase/dehydrase and lipid transport... 0.04 Orthogroups_2024-Update
Bradi3g43180 No alias Polyketide cyclase/dehydrase and lipid transport... 0.04 Orthogroups_2024-Update
Brara.A03291.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Brara.C03448.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Brara.F00007.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU1Hr1G079270.2 No alias Unknown function 0.07 Orthogroups_2024-Update
LOC_Os02g26860 No alias START domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Predicted GO
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0004411 homogentisate 1,2-dioxygenase activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004549 tRNA-specific ribonuclease activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006559 L-phenylalanine catabolic process IEP Predicted GO
BP GO:0006570 tyrosine metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009074 aromatic amino acid family catabolic process IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0043085 positive regulation of catalytic activity IEP Predicted GO
BP GO:0044093 positive regulation of molecular function IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902222 erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 97 257
No external refs found!