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  5. HORVU5Hr1G063630.3

HORVU5Hr1G063630.3


Description : LHC-related protein *(ELIP)


Gene families : OG_42_0000421 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU5Hr1G063630.3
Cluster HCAA Clusters: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
A4A49_24316 No alias early light-induced protein 1, chloroplastic 0.04 Orthogroups_2024-Update
A4A49_27530 No alias early light-induced protein 1, chloroplastic 0.06 Orthogroups_2024-Update
Bradi1g55560 No alias Chlorophyll A-B binding family protein 0.05 Orthogroups_2024-Update
Bradi1g55570 No alias Chlorophyll A-B binding family protein 0.03 Orthogroups_2024-Update
Bradi1g55600 No alias Chlorophyll A-B binding family protein 0.04 Orthogroups_2024-Update
Bradi1g55610 No alias Chlorophyll A-B binding family protein 0.06 Orthogroups_2024-Update
Bradi1g55620 No alias Chlorophyll A-B binding family protein 0.04 Orthogroups_2024-Update
Brara.A02052.1 No alias LHC-related protein *(ELIP) 0.03 Orthogroups_2024-Update
Brara.A02698.1 No alias LHC-related protein *(ELIP) 0.05 Orthogroups_2024-Update
Brara.C03891.1 No alias LHC-related protein *(ELIP) 0.02 Orthogroups_2024-Update
Cre08.g384650 No alias Chlorophyll A-B binding family protein 0.01 Orthogroups_2024-Update
Cre16.g679250 No alias Chlorophyll A-B binding family protein 0.01 Orthogroups_2024-Update
Glyma.10G243800 No alias Chlorophyll A-B binding family protein 0.05 Orthogroups_2024-Update
Glyma.20G150600 No alias Chlorophyll A-B binding family protein 0.06 Orthogroups_2024-Update
HORVU5Hr1G063560.2 No alias LHC-related protein *(ELIP) 0.02 Orthogroups_2024-Update
Kfl00161_0070 kfl00161_0070_v1.1 (at3g22840 : 98.2) Encodes an early light-inducible... 0.02 Orthogroups_2024-Update
MA_10058549g0010 No alias (at3g22840 : 143.0) Encodes an early light-inducible... 0.02 Orthogroups_2024-Update
MA_10432802g0010 No alias (p11432|eli_pea : 172.0) Early light-induced protein,... 0.03 Orthogroups_2024-Update
Mp6g14520.1 No alias ELIP LHC-related protein 0.03 Orthogroups_2024-Update
Pp1s196_69V6 No alias elip2.3 gene for putative early light-induced protein ELIP2.3 0.02 Orthogroups_2024-Update
Pp1s219_37V6 No alias elip-like pseudogene 0.02 Orthogroups_2024-Update
Pp1s255_63V6 No alias elip1.7.2 gene for putative early light-induced protein ELIP1.7.2 0.02 Orthogroups_2024-Update
Seita.2G053300.1 No alias LHC-related protein *(ELIP) 0.07 Orthogroups_2024-Update
Seita.2G053700.1 No alias LHC-related protein *(ELIP) 0.06 Orthogroups_2024-Update
Seita.2G053800.1 No alias LHC-related protein *(ELIP) 0.07 Orthogroups_2024-Update
Sobic.002G052000.2 No alias LHC-related protein *(ELIP) 0.07 Orthogroups_2024-Update
Sobic.002G052100.1 No alias LHC-related protein *(ELIP) 0.06 Orthogroups_2024-Update
Solyc09g082690 No alias superoxide dismutase 0.04 Orthogroups_2024-Update
Sopen09g031550 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen09g031560 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009060 aerobic respiration IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0045333 cellular respiration IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 63 164
No external refs found!