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At3g16880


Description : Putative F-box/kelch-repeat protein At3g16880 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB4]


Gene families : OG_42_0000379 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g16880
Cluster HCCA clusters: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
At3g17490 No alias Putative F-box protein At3g17490... 0.05 Orthogroups_2024-Update
At3g19890 No alias F-box protein At3g19890 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSN8] 0.04 Orthogroups_2024-Update
Brara.K01110.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006527 F-box-assoc_dom_typ1 200 352
IPR001810 F-box_dom 3 46
No external refs found!