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  5. HORVU6Hr1G005510.2

HORVU6Hr1G005510.2


Description : mTERF-type transcription factor


Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G005510.2
Cluster HCAA Clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Glyma.18G112300 No alias Mitochondrial transcription termination factor family protein 0.04 Orthogroups_2024-Update
HORVU7Hr1G081400.3 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os06g12100 No alias mTERF family protein, expressed 0.02 Orthogroups_2024-Update
MA_10427666g0020 No alias (at5g64950 : 113.0) Mitochondrial transcription... 0.07 Orthogroups_2024-Update
MA_10430524g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_33244g0010 No alias (at5g64950 : 115.0) Mitochondrial transcription... 0.03 Orthogroups_2024-Update
Mp3g14990.1 No alias transcription factor (mTERF) 0.02 Orthogroups_2024-Update
PSME_00005632-RA No alias (at1g62120 : 110.0) Mitochondrial transcription... 0.03 Orthogroups_2024-Update
PSME_00006649-RA No alias (at5g64950 : 93.2) Mitochondrial transcription... 0.03 Orthogroups_2024-Update
PSME_00017715-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00020295-RA No alias (at5g64950 : 119.0) Mitochondrial transcription... 0.03 Orthogroups_2024-Update
PSME_00049593-RA No alias (at5g64950 : 87.0) Mitochondrial transcription... 0.02 Orthogroups_2024-Update
Seita.1G321200.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.004G235300.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.004G235700.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR003690 MTERF 166 353
No external refs found!