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  5. HORVU6Hr1G016710.2

HORVU6Hr1G016710.2


Description : LRR-domain extensin


Gene families : OG_42_0000323 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000323_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G016710.2
Cluster HCAA Clusters: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
134330 No alias Leucine-rich repeat (LRR) family protein 0.02 Orthogroups_2024-Update
A4A49_06130 No alias pollen-specific leucine-rich repeat extensin-like protein 1 0.05 Orthogroups_2024-Update
A4A49_26804 No alias pollen-specific leucine-rich repeat extensin-like protein 1 0.03 Orthogroups_2024-Update
A4A49_39130 No alias leucine-rich repeat extensin-like protein 2 0.03 Orthogroups_2024-Update
At2g19780 No alias Leucine-rich repeat (LRR) family protein... 0.03 Orthogroups_2024-Update
Bradi1g05600 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Bradi1g55720 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Bradi2g05080 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Bradi3g03370 No alias leucine-rich repeat/extensin 1 0.02 Orthogroups_2024-Update
Brara.C03718.1 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update
Brara.I01137.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.I04717.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G099491 No alias Leucine-rich repeat (LRR) family protein 0.04 Orthogroups_2024-Update
Glyma.04G035950 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
LOC_Os01g41120 No alias retrotransposon protein, putative, Ty3-gypsy subclass, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g43650 No alias uncharacterized protein At4g06744 precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g49100 No alias retrotransposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Potri.007G139200 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Potri.010G083000 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Potri.014G036700 No alias Leucine-rich repeat (LRR) family protein 0.02 Orthogroups_2024-Update
Potri.018G035100 No alias Leucine-rich repeat (LRR) family protein 0.04 Orthogroups_2024-Update
Pp1s35_242V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.1G092900.1 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update
Seita.2G050800.1 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update
Seita.3G105100.1 No alias LRR-domain extensin 0.02 Orthogroups_2024-Update
Sobic.009G070500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen06g024030 No alias Leucine Rich Repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0009890 negative regulation of biosynthetic process IEP Predicted GO
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0017148 negative regulation of translation IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030597 RNA glycosylase activity IEP Predicted GO
MF GO:0030598 rRNA N-glycosylase activity IEP Predicted GO
BP GO:0031324 negative regulation of cellular metabolic process IEP Predicted GO
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051248 negative regulation of protein metabolic process IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 266 324
IPR013210 LRR_N_plant-typ 56 89
No external refs found!