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  5. At3g19380

At3g19380


Description : U-box domain-containing protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LT79]


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g19380
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
A4A49_22815 No alias e3 ubiquitin-protein ligase pub23 0.03 Orthogroups_2024-Update
Brara.A02878.1 No alias U-Box-group-III E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Glyma.02G102900 No alias plant U-box 26 0.05 Orthogroups_2024-Update
Glyma.19G199300 No alias plant U-box 22 0.04 Orthogroups_2024-Update
Glyma.19G200200 No alias plant U-box 22 0.04 Orthogroups_2024-Update
Kfl00108_0050 kfl00108_0050_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
LOC_Os02g46500 No alias U-box, putative, expressed 0.02 Orthogroups_2024-Update
Potri.002G174500 No alias plant U-box 23 0.03 Orthogroups_2024-Update
Potri.009G016200 No alias plant U-box 23 0.03 Orthogroups_2024-Update
Potri.016G069400 No alias plant U-box 22 0.03 Orthogroups_2024-Update
Potri.016G069500 No alias plant U-box 24 0.03 Orthogroups_2024-Update
Seita.7G095100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G104100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G102000.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc06g074140 No alias LOW QUALITY:U-box domain-containing family protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc11g068940 No alias U-box domain-containing family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
BP GO:0019310 inositol catabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
BP GO:0044275 cellular carbohydrate catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
MF GO:0050113 inositol oxygenase activity IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003613 Ubox_domain 14 86
No external refs found!