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  5. HORVU6Hr1G026400.11

HORVU6Hr1G026400.11


Description : Unknown function


Gene families : OG_42_0003746 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003746_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G026400.11
Cluster HCAA Clusters: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Bradi3g04840 No alias binding 0.06 Orthogroups_2024-Update
Kfl00341_0110 kfl00341_0110_v1.1 (at1g58230 : 1027.0) binding; FUNCTIONS IN: binding;... 0.02 Orthogroups_2024-Update
MA_10434688g0010 No alias (at1g58230 : 1924.0) binding; FUNCTIONS IN: binding;... 0.03 Orthogroups_2024-Update
Pp1s241_91V6 No alias beach domain-containing protein 0.03 Orthogroups_2024-Update
Seita.4G261700.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000409 BEACH_dom 2579 2855
IPR031570 DUF4704 1324 1840
IPR023362 PH-BEACH_dom 2402 2538
No external refs found!