HORVU6Hr1G044840.1

Description : component *(eS24) of small ribosomal-subunit (SSU) proteome

Gene families : OG_42_0001483 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001483_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU6Hr1G044840.1
Cluster	HCAA Clusters: Cluster_246

Target	Alias	Description	ECC score	Gene Family Method
271584	No alias	Ribosomal protein S24e family protein	0.05	Orthogroups_2024-Update
A4A49_64768	No alias	40s ribosomal protein s24-1	0.03	Orthogroups_2024-Update
At3g04920	No alias	40S ribosomal protein S24-1...	0.04	Orthogroups_2024-Update
Bradi3g08680	No alias	Ribosomal protein S24e family protein	0.11	Orthogroups_2024-Update
Brara.A03743.1	No alias	component *(eS24) of small ribosomal-subunit (SSU) proteome	0.02	Orthogroups_2024-Update
Brara.B03525.1	No alias	component *(eS24) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
Brara.E03413.1	No alias	component *(eS24) of small ribosomal-subunit (SSU) proteome	0.02	Orthogroups_2024-Update
Brara.F02892.1	No alias	component *(eS24) of small ribosomal-subunit (SSU) proteome	0.08	Orthogroups_2024-Update
Brara.I00438.1	No alias	component *(eS24) of small ribosomal-subunit (SSU) proteome	0.1	Orthogroups_2024-Update
Cre10.g456200	No alias	Ribosomal protein S24e family protein	0.14	Orthogroups_2024-Update
GRMZM2G151252	No alias	Ribosomal protein S24e family protein	0.03	Orthogroups_2024-Update
GRMZM2G171426	No alias	Ribosomal protein S24e family protein	0.04	Orthogroups_2024-Update
Glyma.03G245300	No alias	Ribosomal protein S24e family protein	0.03	Orthogroups_2024-Update
Glyma.10G160300	No alias	Ribosomal protein S24e family protein	0.1	Orthogroups_2024-Update
Glyma.19G242700	No alias	Ribosomal protein S24e family protein	0.05	Orthogroups_2024-Update
Glyma.20G228100	No alias	Ribosomal protein S24e family protein	0.08	Orthogroups_2024-Update
HORVU7Hr1G088580.1	No alias	component *(eS24) of small ribosomal-subunit (SSU) proteome	0.05	Orthogroups_2024-Update
Kfl00638_0040	kfl00638_0040_v1.1	(at3g04920 : 195.0) Ribosomal protein S24e family...	0.04	Orthogroups_2024-Update
LOC_Os06g36160	No alias	40S ribosomal protein S24, putative, expressed	0.02	Orthogroups_2024-Update
MA_119841g0010	No alias	(at3g04920 : 158.0) Ribosomal protein S24e family...	0.06	Orthogroups_2024-Update
MA_119894g0010	No alias	(at3g04920 : 188.0) Ribosomal protein S24e family...	0.04	Orthogroups_2024-Update
PSME_00005358-RA	No alias	(at3g04920 : 189.0) Ribosomal protein S24e family...	0.07	Orthogroups_2024-Update
PSME_00019619-RA	No alias	(at3g04920 : 187.0) Ribosomal protein S24e family...	0.02	Orthogroups_2024-Update
Potri.010G087800	No alias	Ribosomal protein S24e family protein	0.07	Orthogroups_2024-Update
Potri.013G036100	No alias	Ribosomal protein S24e family protein	0.05	Orthogroups_2024-Update
Pp1s204_49V6	No alias	40s ribosomal protein	0.11	Orthogroups_2024-Update
Pp1s37_112V6	No alias	40s ribosomal protein	0.1	Orthogroups_2024-Update
Pp1s450_3V6	No alias	40s ribosomal protein	0.03	Orthogroups_2024-Update
Pp1s450_9V6	No alias	40s ribosomal protein	0.1	Orthogroups_2024-Update
Seita.1G028300.1	No alias	component *(eS24) of small ribosomal-subunit (SSU) proteome	0.03	Orthogroups_2024-Update
Seita.4G181700.1	No alias	component *(eS24) of small ribosomal-subunit (SSU) proteome	0.08	Orthogroups_2024-Update
Seita.5G301700.1	No alias	component *(eS24) of small ribosomal-subunit (SSU) proteome	0.05	Orthogroups_2024-Update
Sobic.003G280700.1	No alias	component *(eS24) of small ribosomal-subunit (SSU) proteome	0.15	Orthogroups_2024-Update
Sobic.004G099500.1	No alias	component *(eS24) of small ribosomal-subunit (SSU) proteome	0.18	Orthogroups_2024-Update
Sobic.010G166100.1	No alias	component *(eS24) of small ribosomal-subunit (SSU) proteome	0.09	Orthogroups_2024-Update
Solyc06g084230	No alias	40S ribosomal protein S24 (AHRD V3.3 *** K4CUG0_SOLLC)	0.08	Orthogroups_2024-Update
Solyc09g065330	No alias	40S ribosomal protein S24 (AHRD V3.3 *** K4CAS8_SOLLC)	0.07	Orthogroups_2024-Update
Sopen01g041470	No alias	Ribosomal protein S24e	0.02	Orthogroups_2024-Update
Sopen09g027090	No alias	Ribosomal protein S24e	0.12	Orthogroups_2024-Update
evm.model.contig_2036.17	No alias	(at3g04920 : 137.0) Ribosomal protein S24e family...	0.18	Orthogroups_2024-Update
evm.model.tig00000361.64	No alias	(at3g04920 : 129.0) Ribosomal protein S24e family...	0.11	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001882	nucleoside binding	IEP	Predicted GO
MF	GO:0001883	purine nucleoside binding	IEP	Predicted GO
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003697	single-stranded DNA binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003916	DNA topoisomerase activity	IEP	Predicted GO
MF	GO:0003918	DNA topoisomerase type II (ATP-hydrolyzing) activity	IEP	Predicted GO
MF	GO:0003924	GTPase activity	IEP	Predicted GO
MF	GO:0004019	adenylosuccinate synthase activity	IEP	Predicted GO
MF	GO:0004055	argininosuccinate synthase activity	IEP	Predicted GO
MF	GO:0004146	dihydrofolate reductase activity	IEP	Predicted GO
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Predicted GO
MF	GO:0005048	signal sequence binding	IEP	Predicted GO
MF	GO:0005488	binding	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
MF	GO:0005525	GTP binding	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006259	DNA metabolic process	IEP	Predicted GO
BP	GO:0006265	DNA topological change	IEP	Predicted GO
BP	GO:0006275	regulation of DNA replication	IEP	Predicted GO
BP	GO:0006364	rRNA processing	IEP	Predicted GO
BP	GO:0006497	protein lipidation	IEP	Predicted GO
BP	GO:0006505	GPI anchor metabolic process	IEP	Predicted GO
BP	GO:0006506	GPI anchor biosynthetic process	IEP	Predicted GO
BP	GO:0006525	arginine metabolic process	IEP	Predicted GO
BP	GO:0006526	arginine biosynthetic process	IEP	Predicted GO
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Predicted GO
BP	GO:0006621	protein retention in ER lumen	IEP	Predicted GO
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	Predicted GO
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predicted GO
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006801	superoxide metabolic process	IEP	Predicted GO
MF	GO:0008094	DNA-dependent ATPase activity	IEP	Predicted GO
MF	GO:0008483	transaminase activity	IEP	Predicted GO
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	Predicted GO
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0009396	folic acid-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0016072	rRNA metabolic process	IEP	Predicted GO
MF	GO:0016462	pyrophosphatase activity	IEP	Predicted GO
MF	GO:0016603	glutaminyl-peptide cyclotransferase activity	IEP	Predicted GO
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0016755	transferase activity, transferring amino-acyl groups	IEP	Predicted GO
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Predicted GO
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Predicted GO
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Predicted GO
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Predicted GO
BP	GO:0017186	peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	IEP	Predicted GO
BP	GO:0018199	peptidyl-glutamine modification	IEP	Predicted GO
MF	GO:0019001	guanyl nucleotide binding	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
BP	GO:0032507	maintenance of protein location in cell	IEP	Predicted GO
MF	GO:0032549	ribonucleoside binding	IEP	Predicted GO
MF	GO:0032550	purine ribonucleoside binding	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Predicted GO
BP	GO:0034470	ncRNA processing	IEP	Predicted GO
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
MF	GO:0042277	peptide binding	IEP	Predicted GO
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0045185	maintenance of protein location	IEP	Predicted GO
BP	GO:0046483	heterocycle metabolic process	IEP	Predicted GO
BP	GO:0046653	tetrahydrofolate metabolic process	IEP	Predicted GO
BP	GO:0046654	tetrahydrofolate biosynthetic process	IEP	Predicted GO
MF	GO:0046923	ER retention sequence binding	IEP	Predicted GO
BP	GO:0051235	maintenance of location	IEP	Predicted GO
BP	GO:0051651	maintenance of location in cell	IEP	Predicted GO
MF	GO:0061505	DNA topoisomerase II activity	IEP	Predicted GO
MF	GO:0070001	aspartic-type peptidase activity	IEP	Predicted GO
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Predicted GO
BP	GO:0072595	maintenance of protein localization in organelle	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
MF	GO:0097159	organic cyclic compound binding	IEP	Predicted GO
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predicted GO
MF	GO:1901363	heterocyclic compound binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001976	Ribosomal_S24e	70	148

External Links

No external refs found!

HORVU6Hr1G044840.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation