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  5. HORVU6Hr1G075650.1

HORVU6Hr1G075650.1


Description : TCP-type transcription factor


Gene families : OG_42_0000261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G075650.1
Cluster HCAA Clusters: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
Bradi4g35520 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G142751 No alias TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.03 Orthogroups_2024-Update
Glyma.04G170600 No alias TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.02 Orthogroups_2024-Update
Glyma.08G299400 No alias TCP family transcription factor 0.02 Orthogroups_2024-Update
Glyma.09G284500 No alias TCP family transcription factor 0.04 Orthogroups_2024-Update
Glyma.17G099100 No alias TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.03 Orthogroups_2024-Update
HORVU5Hr1G117990.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Potri.006G125800 No alias TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.02 Orthogroups_2024-Update
Pp1s446_21V6 No alias T6C23.11; TCP family transcription factor, putative... 0.03 Orthogroups_2024-Update
Solyc05g007420 No alias TCP transcription factor 23 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 64 236
No external refs found!