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  5. HORVU6Hr1G086790.1

HORVU6Hr1G086790.1


Description : Unknown function


Gene families : OG_42_0000874 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000874_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G086790.1
Cluster HCAA Clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
A4A49_15259 No alias hypothetical protein 0.04 Orthogroups_2024-Update
A4A49_41041 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At5g11090 No alias At5g11090 [Source:UniProtKB/TrEMBL;Acc:Q9FY56] 0.03 Orthogroups_2024-Update
At5g20370 No alias Serine-rich protein-like protein... 0.03 Orthogroups_2024-Update
At5g25280 No alias AT5g25280/F18G18_20 [Source:UniProtKB/TrEMBL;Acc:Q93WB2] 0.02 Orthogroups_2024-Update
Brara.C00935.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU0Hr1G017380.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU6Hr1G086810.2 No alias Unknown function 0.06 Orthogroups_2024-Update
LOC_Os02g55610 No alias serine-rich protein, putative, expressed 0.04 Orthogroups_2024-Update
MA_10432433g0020 No alias (at5g11090 : 114.0) serine-rich protein-related; BEST... 0.03 Orthogroups_2024-Update
MA_107952g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_122058g0010 No alias (at5g25280 : 105.0) serine-rich protein-related; BEST... 0.02 Orthogroups_2024-Update
MA_163659g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_172637g0010 No alias (at5g11090 : 142.0) serine-rich protein-related; BEST... 0.04 Orthogroups_2024-Update
MA_75170g0010 No alias (at5g25280 : 129.0) serine-rich protein-related; BEST... 0.03 Orthogroups_2024-Update
MA_9485570g0010 No alias (at5g11090 : 114.0) serine-rich protein-related; BEST... 0.04 Orthogroups_2024-Update
MA_99593g0010 No alias (at5g11090 : 122.0) serine-rich protein-related; BEST... 0.05 Orthogroups_2024-Update
PSME_00042823-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.006G060800 No alias serine-rich protein-related 0.03 Orthogroups_2024-Update
Potri.018G023300 No alias serine-rich protein-related 0.03 Orthogroups_2024-Update
Potri.018G120300 No alias serine-rich protein-related 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!