Description : component *(eL37) of large ribosomal-subunit (LSU) proteome
Gene families : OG_42_0001791 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001791_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Hordeum vulgare: HORVU6Hr1G090070.1 | |
Cluster | HCAA Clusters: Cluster_145 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At1g15250 | No alias | 60S ribosomal protein L37-1... | 0.06 | Orthogroups_2024-Update | |
At3g16080 | No alias | 60S ribosomal protein L37-3... | 0.04 | Orthogroups_2024-Update | |
Bradi3g01190 | No alias | Zinc-binding ribosomal protein family protein | 0.09 | Orthogroups_2024-Update | |
Bradi3g55170 | No alias | Zinc-binding ribosomal protein family protein | 0.08 | Orthogroups_2024-Update | |
Brara.E01589.1 | No alias | component *(eL37) of large ribosomal-subunit (LSU) proteome | 0.11 | Orthogroups_2024-Update | |
Brara.E02541.1 | No alias | component *(eL37) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Brara.F00200.1 | No alias | component *(eL37) of large ribosomal-subunit (LSU) proteome | 0.1 | Orthogroups_2024-Update | |
Brara.H00172.1 | No alias | component *(eL37) of large ribosomal-subunit (LSU) proteome | 0.08 | Orthogroups_2024-Update | |
Cre10.g430400 | No alias | Zinc-binding ribosomal protein family protein | 0.07 | Orthogroups_2024-Update | |
GRMZM2G168674 | No alias | Zinc-binding ribosomal protein family protein | 0.07 | Orthogroups_2024-Update | |
Glyma.08G205500 | No alias | Zinc-binding ribosomal protein family protein | 0.09 | Orthogroups_2024-Update | |
Glyma.13G357900 | No alias | Zinc-binding ribosomal protein family protein | 0.06 | Orthogroups_2024-Update | |
Glyma.15G015500 | No alias | Zinc-binding ribosomal protein family protein | 0.05 | Orthogroups_2024-Update | |
Kfl00864_0030 | kfl00864_0030_v1.1 | (at3g16080 : 136.0) Zinc-binding ribosomal protein... | 0.03 | Orthogroups_2024-Update | |
MA_129829g0010 | No alias | (at3g16080 : 128.0) Zinc-binding ribosomal protein... | 0.04 | Orthogroups_2024-Update | |
Mp2g12400.1 | No alias | component RPL37 of LSU proteome component | 0.08 | Orthogroups_2024-Update | |
PSME_00050791-RA | No alias | (at3g16080 : 155.0) Zinc-binding ribosomal protein... | 0.1 | Orthogroups_2024-Update | |
Potri.006G243300 | No alias | Zinc-binding ribosomal protein family protein | 0.04 | Orthogroups_2024-Update | |
Potri.018G036900 | No alias | Zinc-binding ribosomal protein family protein | 0.1 | Orthogroups_2024-Update | |
Pp1s152_133V6 | No alias | 60s ribosomal protein l37 | 0.11 | Orthogroups_2024-Update | |
Pp1s222_87V6 | No alias | 60s ribosomal protein l37 | 0.12 | Orthogroups_2024-Update | |
Pp1s24_197V6 | No alias | 60s ribosomal protein l37 | 0.02 | Orthogroups_2024-Update | |
Pp1s3_512V6 | No alias | 60s ribosomal protein l37 | 0.13 | Orthogroups_2024-Update | |
Pp1s475_18V6 | No alias | 60s ribosomal protein l37 | 0.18 | Orthogroups_2024-Update | |
Seita.1G119400.1 | No alias | component *(eL37) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Seita.1G363500.1 | No alias | component *(eL37) of large ribosomal-subunit (LSU) proteome | 0.11 | Orthogroups_2024-Update | |
Sobic.001G347901.1 | No alias | component *(eL37) of large ribosomal-subunit (LSU) proteome | 0.2 | Orthogroups_2024-Update | |
Sobic.004G008400.1 | No alias | component *(eL37) of large ribosomal-subunit (LSU) proteome | 0.11 | Orthogroups_2024-Update | |
Solyc03g120780 | No alias | Ribosomal protein L37 (AHRD V3.3 *** K4BMM7_SOLLC) | 0.07 | Orthogroups_2024-Update | |
Solyc06g066660 | No alias | Ribosomal protein L37 (AHRD V3.3 *** M1BDD8_SOLTU) | 0.08 | Orthogroups_2024-Update | |
Solyc08g068180 | No alias | Ribosomal protein L37 (AHRD V3.3 *** K4CM42_SOLLC) | 0.1 | Orthogroups_2024-Update | |
Sopen03g039600 | No alias | Ribosomal protein L37e | 0.14 | Orthogroups_2024-Update | |
Sopen06g024930 | No alias | Ribosomal protein L37e | 0.13 | Orthogroups_2024-Update | |
evm.model.tig00020610.80 | No alias | (at1g52300 : 115.0) Zinc-binding ribosomal protein... | 0.09 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | 16Dec |
CC | GO:0005840 | ribosome | IEA | 16Dec |
BP | GO:0006412 | translation | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000272 | polysaccharide catabolic process | IEP | Predicted GO |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003729 | mRNA binding | IEP | Predicted GO |
MF | GO:0003854 | 3-beta-hydroxy-delta5-steroid dehydrogenase activity | IEP | Predicted GO |
MF | GO:0004018 | N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity | IEP | Predicted GO |
MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | Predicted GO |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predicted GO |
CC | GO:0005787 | signal peptidase complex | IEP | Predicted GO |
CC | GO:0005849 | mRNA cleavage factor complex | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006188 | IMP biosynthetic process | IEP | Predicted GO |
BP | GO:0006378 | mRNA polyadenylation | IEP | Predicted GO |
BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Predicted GO |
BP | GO:0006465 | signal peptide processing | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006694 | steroid biosynthetic process | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0006766 | vitamin metabolic process | IEP | Predicted GO |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Predicted GO |
BP | GO:0006771 | riboflavin metabolic process | IEP | Predicted GO |
BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | Predicted GO |
BP | GO:0008202 | steroid metabolic process | IEP | Predicted GO |
BP | GO:0009110 | vitamin biosynthetic process | IEP | Predicted GO |
BP | GO:0009231 | riboflavin biosynthetic process | IEP | Predicted GO |
CC | GO:0009349 | riboflavin synthase complex | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
MF | GO:0016161 | beta-amylase activity | IEP | Predicted GO |
MF | GO:0016229 | steroid dehydrogenase activity | IEP | Predicted GO |
MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Predicted GO |
MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | Predicted GO |
MF | GO:0016842 | amidine-lyase activity | IEP | Predicted GO |
MF | GO:0016874 | ligase activity | IEP | Predicted GO |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predicted GO |
MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Predicted GO |
CC | GO:0017119 | Golgi transport complex | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
BP | GO:0031123 | RNA 3'-end processing | IEP | Predicted GO |
BP | GO:0031124 | mRNA 3'-end processing | IEP | Predicted GO |
MF | GO:0033764 | steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predicted GO |
BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0043038 | amino acid activation | IEP | Predicted GO |
BP | GO:0043039 | tRNA aminoacylation | IEP | Predicted GO |
BP | GO:0043631 | RNA polyadenylation | IEP | Predicted GO |
BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
BP | GO:0046040 | IMP metabolic process | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predicted GO |
CC | GO:1905368 | peptidase complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001569 | Ribosomal_L37e | 27 | 78 |
No external refs found! |