At3g25040

Description : ER lumen protein-retaining receptor B [Source:UniProtKB/Swiss-Prot;Acc:Q8VWI1]

Gene families : OG_42_0002688 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002688_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At3g25040
Cluster	HCCA clusters: Cluster_70

Target	Alias	Description	ECC score	Gene Family Method	Actions
evm.model.tig00000829.17	No alias	(at3g25040 : 245.0) Encodes ERD2b. a homolog of the...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005048	signal sequence binding	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006621	protein retention in ER lumen	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0032507	maintenance of protein location in cell	None	Extended
MF	GO:0033218	amide binding	None	Extended
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	None	Extended
MF	GO:0042277	peptide binding	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0045185	maintenance of protein location	None	Extended
MF	GO:0046923	ER retention sequence binding	IEA	InterProScan predictions
BP	GO:0051179	localization	None	Extended
BP	GO:0051235	maintenance of location	None	Extended
BP	GO:0051651	maintenance of location in cell	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0072595	maintenance of protein localization in organelle	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004583	dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity	IEP	Predicted GO
MF	GO:0004592	pantoate-beta-alanine ligase activity	IEP	Predicted GO
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predicted GO
CC	GO:0005795	Golgi stack	IEP	Predicted GO
BP	GO:0006488	dolichol-linked oligosaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0006490	oligosaccharide-lipid intermediate biosynthetic process	IEP	Predicted GO
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Predicted GO
BP	GO:0006720	isoprenoid metabolic process	IEP	Predicted GO
BP	GO:0006721	terpenoid metabolic process	IEP	Predicted GO
BP	GO:0006766	vitamin metabolic process	IEP	Predicted GO
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Predicted GO
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Predicted GO
MF	GO:0008455	alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	IEP	Predicted GO
MF	GO:0008685	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity	IEP	Predicted GO
BP	GO:0009058	biosynthetic process	IEP	Predicted GO
BP	GO:0009110	vitamin biosynthetic process	IEP	Predicted GO
CC	GO:0015934	large ribosomal subunit	IEP	Predicted GO
BP	GO:0015939	pantothenate metabolic process	IEP	Predicted GO
BP	GO:0015940	pantothenate biosynthetic process	IEP	Predicted GO
BP	GO:0016114	terpenoid biosynthetic process	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
MF	GO:0016849	phosphorus-oxygen lyase activity	IEP	Predicted GO
MF	GO:0016881	acid-amino acid ligase activity	IEP	Predicted GO
CC	GO:0031984	organelle subcompartment	IEP	Predicted GO
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Predicted GO
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0044255	cellular lipid metabolic process	IEP	Predicted GO
CC	GO:0044391	ribosomal subunit	IEP	Predicted GO
CC	GO:0044422	organelle part	IEP	Predicted GO
CC	GO:0044431	Golgi apparatus part	IEP	Predicted GO
CC	GO:0044446	intracellular organelle part	IEP	Predicted GO
MF	GO:0070001	aspartic-type peptidase activity	IEP	Predicted GO
CC	GO:0098791	Golgi subcompartment	IEP	Predicted GO
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	Predicted GO
BP	GO:1901576	organic substance biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000133	ER_ret_rcpt	28	171

External Links

No external refs found!

At3g25040

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation