Description : Putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LJR6]
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Arabidopsis release: At3g25060 | |
Cluster | HCCA clusters: Cluster_116 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
399 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
At3g16610 | No alias | Pentatricopeptide repeat-containing protein At3g16610... | 0.06 | Orthogroups_2024-Update | |
Bradi5g27691 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Brara.B03138.1 | No alias | RNA editing factor *(OTP85) | 0.03 | Orthogroups_2024-Update | |
Brara.H03086.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
GRMZM2G029859 | No alias | dynamin-like protein 6 | 0.04 | Orthogroups_2024-Update | |
GRMZM2G163359 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | Orthogroups_2024-Update | |
Glyma.01G173200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.07G173900 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.08G034600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
Glyma.09G088000 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.09G209700 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.12G102800 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.12G183600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.13G150300 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.15G093800 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU0Hr1G023470.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G085770.2 | No alias | RNA editing factor *(CRR2) | 0.03 | Orthogroups_2024-Update | |
HORVU5Hr1G079090.7 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G011570.2 | No alias | RNA editing factor *(CRR22) | 0.03 | Orthogroups_2024-Update | |
LOC_Os02g46980 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os03g13830 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os09g38310 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
PSME_00006107-RA | No alias | (at1g11290 : 668.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
PSME_00044695-RA | No alias | (at2g22070 : 545.0) pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
PSME_00051747-RA | No alias | (at1g11290 : 641.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
Seita.3G006500.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.4G168200.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.9G057100.1 | No alias | RNA editing factor *(OTP85) | 0.02 | Orthogroups_2024-Update | |
Solyc03g096610 | No alias | Pentatricopeptide repeat (PPR) superfamily protein (AHRD... | 0.04 | Orthogroups_2024-Update | |
Solyc11g067210 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
MF | GO:0005088 | Ras guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
MF | GO:0005089 | Rho guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
MF | GO:0017016 | Ras GTPase binding | IEP | Predicted GO |
MF | GO:0017048 | Rho GTPase binding | IEP | Predicted GO |
MF | GO:0031267 | small GTPase binding | IEP | Predicted GO |
MF | GO:0046983 | protein dimerization activity | IEP | Predicted GO |
MF | GO:0051020 | GTPase binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 284 | 314 |
IPR002885 | Pentatricopeptide_repeat | 457 | 478 |
IPR002885 | Pentatricopeptide_repeat | 256 | 279 |
IPR002885 | Pentatricopeptide_repeat | 184 | 213 |
IPR002885 | Pentatricopeptide_repeat | 153 | 181 |
IPR002885 | Pentatricopeptide_repeat | 381 | 429 |
IPR002885 | Pentatricopeptide_repeat | 80 | 126 |
No external refs found! |