Description : component *(eL22) of large ribosomal-subunit (LSU) proteome
Gene families : OG_42_0001702 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001702_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Hordeum vulgare: HORVU7Hr1G080630.1 | |
Cluster | HCAA Clusters: Cluster_61 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
270704 | No alias | Ribosomal L22e protein family | 0.14 | Orthogroups_2024-Update | |
A4A49_00389 | No alias | 60s ribosomal protein l22-2 | 0.06 | Orthogroups_2024-Update | |
At3g05560 | No alias | 60S ribosomal protein L22-2... | 0.04 | Orthogroups_2024-Update | |
Bradi1g62830 | No alias | Ribosomal L22e protein family | 0.05 | Orthogroups_2024-Update | |
Brara.A03699.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.06 | Orthogroups_2024-Update | |
Brara.C03109.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
Brara.E03358.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.12 | Orthogroups_2024-Update | |
Brara.F02844.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.1 | Orthogroups_2024-Update | |
Cre07.g357850 | No alias | Ribosomal L22e protein family | 0.14 | Orthogroups_2024-Update | |
GRMZM2G063617 | No alias | Ribosomal L22e protein family | 0.05 | Orthogroups_2024-Update | |
GRMZM2G134107 | No alias | Ribosomal L22e protein family | 0.07 | Orthogroups_2024-Update | |
Glyma.02G017800 | No alias | Ribosomal L22e protein family | 0.11 | Orthogroups_2024-Update | |
Glyma.03G235000 | No alias | Ribosomal L22e protein family | 0.04 | Orthogroups_2024-Update | |
Glyma.10G018200 | No alias | Ribosomal L22e protein family | 0.1 | Orthogroups_2024-Update | |
Glyma.10G151200 | No alias | Ribosomal L22e protein family | 0.02 | Orthogroups_2024-Update | |
Glyma.19G232700 | No alias | Ribosomal L22e protein family | 0.08 | Orthogroups_2024-Update | |
Glyma.20G237000 | No alias | Ribosomal L22e protein family | 0.06 | Orthogroups_2024-Update | |
HORVU2Hr1G019160.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.06 | Orthogroups_2024-Update | |
Kfl00104_0130 | kfl00104_0130_v1.1 | (at5g27770 : 144.0) Ribosomal L22e protein family;... | 0.03 | Orthogroups_2024-Update | |
LOC_Os03g22340 | No alias | 60S ribosomal protein L22-2, putative, expressed | 0.03 | Orthogroups_2024-Update | |
Mp4g02920.1 | No alias | component RPL22 of LSU proteome component | 0.03 | Orthogroups_2024-Update | |
PSME_00024504-RA | No alias | (at3g05560 : 145.0) Ribosomal L22e protein family;... | 0.06 | Orthogroups_2024-Update | |
Potri.005G024400 | No alias | Ribosomal L22e protein family | 0.07 | Orthogroups_2024-Update | |
Potri.010G012700 | No alias | Ribosomal L22e protein family | 0.07 | Orthogroups_2024-Update | |
Potri.013G015300 | No alias | Ribosomal L22e protein family | 0.02 | Orthogroups_2024-Update | |
Potri.014G128800 | No alias | Ribosomal L22e protein family | 0.08 | Orthogroups_2024-Update | |
Pp1s180_116V6 | No alias | 60s ribosomal protein | 0.02 | Orthogroups_2024-Update | |
Pp1s283_20V6 | No alias | 60s ribosomal protein | 0.1 | Orthogroups_2024-Update | |
Pp1s39_76V6 | No alias | 60s ribosomal protein | 0.03 | Orthogroups_2024-Update | |
Pp1s457_15V6 | No alias | 60s ribosomal protein | 0.1 | Orthogroups_2024-Update | |
Seita.2G429500.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.1 | Orthogroups_2024-Update | |
Seita.9G409100.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.12 | Orthogroups_2024-Update | |
Sobic.001G376600.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.16 | Orthogroups_2024-Update | |
Sobic.002G414700.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.13 | Orthogroups_2024-Update | |
Solyc01g099830 | No alias | 60S ribosomal protein L22-2 (AHRD V3.3 *** W9QTY3_9ROSA) | 0.1 | Orthogroups_2024-Update | |
Solyc09g075150 | No alias | 60S ribosomal protein L22-2 (AHRD V3.3 *** RL222_ARATH) | 0.05 | Orthogroups_2024-Update | |
Solyc09g075160 | No alias | 60S ribosomal protein L22-2 (AHRD V3.3 *** RL222_ARATH) | 0.03 | Orthogroups_2024-Update | |
Sopen01g043340 | No alias | Ribosomal L22e protein family | 0.1 | Orthogroups_2024-Update | |
Sopen09g029970 | No alias | Ribosomal L22e protein family | 0.04 | Orthogroups_2024-Update | |
Sopen09g029980 | No alias | Ribosomal L22e protein family | 0.09 | Orthogroups_2024-Update | |
evm.model.contig_2121.19 | No alias | (at3g05560 : 87.0) Ribosomal L22e protein family;... | 0.15 | Orthogroups_2024-Update | |
evm.model.tig00001206.7 | No alias | (at3g05560 : 112.0) Ribosomal L22e protein family;... | 0.09 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | 16Dec |
CC | GO:0005840 | ribosome | IEA | 16Dec |
BP | GO:0006412 | translation | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0004019 | adenylosuccinate synthase activity | IEP | Predicted GO |
MF | GO:0004146 | dihydrofolate reductase activity | IEP | Predicted GO |
MF | GO:0005048 | signal sequence binding | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
BP | GO:0006275 | regulation of DNA replication | IEP | Predicted GO |
BP | GO:0006353 | DNA-templated transcription, termination | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006497 | protein lipidation | IEP | Predicted GO |
BP | GO:0006505 | GPI anchor metabolic process | IEP | Predicted GO |
BP | GO:0006506 | GPI anchor biosynthetic process | IEP | Predicted GO |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006621 | protein retention in ER lumen | IEP | Predicted GO |
BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0006783 | heme biosynthetic process | IEP | Predicted GO |
BP | GO:0006784 | heme a biosynthetic process | IEP | Predicted GO |
BP | GO:0006801 | superoxide metabolic process | IEP | Predicted GO |
BP | GO:0006886 | intracellular protein transport | IEP | Predicted GO |
MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Predicted GO |
MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Predicted GO |
MF | GO:0010011 | auxin binding | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
MF | GO:0016462 | pyrophosphatase activity | IEP | Predicted GO |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016653 | oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor | IEP | Predicted GO |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Predicted GO |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
CC | GO:0030126 | COPI vesicle coat | IEP | Predicted GO |
BP | GO:0032507 | maintenance of protein location in cell | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
BP | GO:0042168 | heme metabolic process | IEP | Predicted GO |
MF | GO:0042277 | peptide binding | IEP | Predicted GO |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0042440 | pigment metabolic process | IEP | Predicted GO |
BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Predicted GO |
MF | GO:0042562 | hormone binding | IEP | Predicted GO |
BP | GO:0045185 | maintenance of protein location | IEP | Predicted GO |
BP | GO:0046148 | pigment biosynthetic process | IEP | Predicted GO |
BP | GO:0046160 | heme a metabolic process | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
BP | GO:0046653 | tetrahydrofolate metabolic process | IEP | Predicted GO |
BP | GO:0046654 | tetrahydrofolate biosynthetic process | IEP | Predicted GO |
MF | GO:0046923 | ER retention sequence binding | IEP | Predicted GO |
BP | GO:0051188 | cofactor biosynthetic process | IEP | Predicted GO |
BP | GO:0051235 | maintenance of location | IEP | Predicted GO |
BP | GO:0051651 | maintenance of location in cell | IEP | Predicted GO |
MF | GO:0061505 | DNA topoisomerase II activity | IEP | Predicted GO |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Predicted GO |
BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002671 | Ribosomal_L22e | 21 | 129 |
No external refs found! |