At3g27170

Description : CLC-B [Source:UniProtKB/TrEMBL;Acc:A0A178VKG6]

Gene families : OG_42_0000631 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000631_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At3g27170
Cluster	HCCA clusters: Cluster_9

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g20070	No alias	Voltage-gated chloride channel family protein	0.04	Orthogroups_2024-Update
Bradi4g07880	No alias	chloride channel A	0.04	Orthogroups_2024-Update
Brara.B03276.1	No alias	anion channel / anion	0.06	Orthogroups_2024-Update
Brara.G01499.1	No alias	anion channel / anion	0.03	Orthogroups_2024-Update
GRMZM2G113409	No alias	chloride channel C	0.03	Orthogroups_2024-Update
Glyma.05G077100	No alias	chloride channel B	0.03	Orthogroups_2024-Update
HORVU0Hr1G015220.3	No alias	anion channel / anion	0.02	Orthogroups_2024-Update
LOC_Os12g25200	No alias	chloride transporter, chloride channel family, putative,...	0.02	Orthogroups_2024-Update
Potri.003G001500	No alias	chloride channel C	0.03	Orthogroups_2024-Update
Potri.004G228300	No alias	chloride channel C	0.05	Orthogroups_2024-Update
Potri.006G064000	No alias	Voltage-gated chloride channel family protein	0.03	Orthogroups_2024-Update
Seita.3G300700.1	No alias	anion channel / anion	0.03	Orthogroups_2024-Update
Sobic.004G075800.1	No alias	anion channel / anion	0.03	Orthogroups_2024-Update
Sobic.006G090500.2	No alias	anion channel / anion	0.04	Orthogroups_2024-Update
Sopen02g017190	No alias	Voltage gated chloride channel	0.02	Orthogroups_2024-Update
evm.model.contig_543.4	No alias	(at5g26240 : 157.0) member of Anion channel protein...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005244	voltage-gated ion channel activity	None	Extended
MF	GO:0005247	voltage-gated chloride channel activity	IEA	InterProScan predictions
MF	GO:0005253	anion channel activity	None	Extended
MF	GO:0005254	chloride channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006821	chloride transport	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008308	voltage-gated anion channel activity	None	Extended
MF	GO:0008509	anion transmembrane transporter activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015103	inorganic anion transmembrane transporter activity	None	Extended
MF	GO:0015108	chloride transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022839	ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0004556	alpha-amylase activity	IEP	Predicted GO
MF	GO:0005319	lipid transporter activity	IEP	Predicted GO
BP	GO:0006814	sodium ion transport	IEP	Predicted GO
BP	GO:0006869	lipid transport	IEP	Predicted GO
BP	GO:0009719	response to endogenous stimulus	IEP	Predicted GO
BP	GO:0009725	response to hormone	IEP	Predicted GO
BP	GO:0009733	response to auxin	IEP	Predicted GO
BP	GO:0010033	response to organic substance	IEP	Predicted GO
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Predicted GO
MF	GO:0016843	amine-lyase activity	IEP	Predicted GO
MF	GO:0016844	strictosidine synthase activity	IEP	Predicted GO
MF	GO:0035299	inositol pentakisphosphate 2-kinase activity	IEP	Predicted GO
BP	GO:0042221	response to chemical	IEP	Predicted GO
BP	GO:0061024	membrane organization	IEP	Predicted GO
BP	GO:0120009	intermembrane lipid transfer	IEP	Predicted GO
MF	GO:0120013	intermembrane lipid transfer activity	IEP	Predicted GO
MF	GO:0140110	transcription regulator activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000644	CBS_dom	710	761
IPR001807	Cl-channel_volt-gated	142	556

External Links

No external refs found!

At3g27170

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation