Sobic.001G040200.1

Description : NAC-type transcription factor

Gene families : OG_42_0000084 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000084_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.001G040200.1
Cluster	HCAA Clusters: Cluster_91

Target	Alias	Description	ECC score	Gene Family Method
147012	No alias	NAC (No Apical Meristem) domain transcriptional...	0.06	Orthogroups_2024-Update
A4A49_11037	No alias	nac domain-containing protein 2	0.05	Orthogroups_2024-Update
A4A49_22805	No alias	nac transcription factor 29	0.04	Orthogroups_2024-Update
A4A49_31784	No alias	nac domain-containing protein 35	0.04	Orthogroups_2024-Update
A4A49_40016	No alias	nac domain-containing protein 72	0.05	Orthogroups_2024-Update
At1g52880	No alias	NARS2 [Source:UniProtKB/TrEMBL;Acc:A0A178W6K4]	0.03	Orthogroups_2024-Update
At1g69490	No alias	NAP [Source:UniProtKB/TrEMBL;Acc:A0A178W8K0]	0.03	Orthogroups_2024-Update
At3g15510	No alias	NAC transcription factor 56...	0.04	Orthogroups_2024-Update
Bradi1g04150	No alias	NAC domain containing protein 102	0.03	Orthogroups_2024-Update
Bradi1g17480	No alias	NAC domain containing protein 47	0.03	Orthogroups_2024-Update
Bradi1g24390	No alias	NAC domain containing protein 25	0.04	Orthogroups_2024-Update
Bradi2g57100	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Bradi3g59866	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Brara.A03784.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B00301.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Brara.E00174.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E02589.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Brara.F00162.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Brara.F03418.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.K00090.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G068973	No alias	NAC (No Apical Meristem) domain transcriptional...	0.05	Orthogroups_2024-Update
GRMZM2G123667	No alias	NAC (No Apical Meristem) domain transcriptional...	0.05	Orthogroups_2024-Update
Glyma.04G208300	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Glyma.06G114000	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Glyma.06G157400	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Glyma.08G009700	No alias	NAC domain containing protein 83	0.04	Orthogroups_2024-Update
Glyma.13G243200	No alias	NAC domain containing protein 25	0.03	Orthogroups_2024-Update
Glyma.13G279900	No alias	NAC domain containing protein 3	0.04	Orthogroups_2024-Update
HORVU1Hr1G063740.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
HORVU3Hr1G080100.7	No alias	NAC-type transcription factor	0.09	Orthogroups_2024-Update
LOC_Os01g66490	No alias	no apical meristem protein, putative, expressed	0.07	Orthogroups_2024-Update
LOC_Os05g34600	No alias	no apical meristem protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os07g12340	No alias	NAC domain-containing protein 67, putative, expressed	0.06	Orthogroups_2024-Update
MA_103386g0010	No alias	(q52qh4\|nac68_orysa : 298.0) NAC domain-containing...	0.03	Orthogroups_2024-Update
MA_10434250g0010	No alias	(at2g02450 : 274.0) NAC domain containing protein 35...	0.03	Orthogroups_2024-Update
MA_123846g0010	No alias	(at3g15510 : 259.0) Note of caution: not to be confused...	0.03	Orthogroups_2024-Update
MA_137415g0010	No alias	(at1g61110 : 273.0) NAC domain containing protein 25...	0.03	Orthogroups_2024-Update
MA_18153g0010	No alias	(at1g52880 : 291.0) Transcription factor with a NAC...	0.03	Orthogroups_2024-Update
MA_264971g0010	No alias	(q52qh4\|nac68_orysa : 256.0) NAC domain-containing...	0.05	Orthogroups_2024-Update
MA_5115g0010	No alias	(q7f2l3\|nac48_orysa : 256.0) NAC domain-containing...	0.04	Orthogroups_2024-Update
MA_64687g0010	No alias	(q52qh4\|nac68_orysa : 291.0) NAC domain-containing...	0.03	Orthogroups_2024-Update
MA_75192g0010	No alias	(q52qh4\|nac68_orysa : 268.0) NAC domain-containing...	0.06	Orthogroups_2024-Update
PSME_00017053-RA	No alias	(at1g01720 : 241.0) Belongs to a large family of...	0.02	Orthogroups_2024-Update
PSME_00020753-RA	No alias	(q52qh4\|nac68_orysa : 271.0) NAC domain-containing...	0.03	Orthogroups_2024-Update
PSME_00023319-RA	No alias	(q52qh4\|nac68_orysa : 291.0) NAC domain-containing...	0.03	Orthogroups_2024-Update
PSME_00029399-RA	No alias	(q52qh4\|nac68_orysa : 261.0) NAC domain-containing...	0.05	Orthogroups_2024-Update
PSME_00030259-RA	No alias	(q7f2l3\|nac48_orysa : 263.0) NAC domain-containing...	0.04	Orthogroups_2024-Update
PSME_00050136-RA	No alias	(q52qh4\|nac68_orysa : 294.0) NAC domain-containing...	0.08	Orthogroups_2024-Update
PSME_00050686-RA	No alias	(q52qh4\|nac68_orysa : 274.0) NAC domain-containing...	0.05	Orthogroups_2024-Update
PSME_00050750-RA	No alias	(at1g52880 : 206.0) Transcription factor with a NAC...	0.02	Orthogroups_2024-Update
Potri.001G404100	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
Potri.005G069500	No alias	NAC (No Apical Meristem) domain transcriptional...	0.06	Orthogroups_2024-Update
Potri.006G129400	No alias	NAC domain containing protein 25	0.02	Orthogroups_2024-Update
Potri.011G123300	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
Potri.019G031400	No alias	NAC domain containing protein 47	0.03	Orthogroups_2024-Update
Seita.2G086600.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Seita.3G238700.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G069100.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G358900.1	No alias	NAC-type transcription factor	0.06	Orthogroups_2024-Update
Seita.8G008100.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.001G385800.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G105800.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.003G334600.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.003G382300.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.005G064600.2	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.008G094700.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Solyc06g060230	No alias	NAC domain-containing protein, putative (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc07g063410	No alias	JA2-like	0.03	Orthogroups_2024-Update
Sopen01g045160	No alias	No apical meristem (NAM) protein	0.03	Orthogroups_2024-Update
Sopen04g004570	No alias	No apical meristem (NAM) protein	0.04	Orthogroups_2024-Update
Sopen05g003630	No alias	No apical meristem (NAM) protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Predicted GO
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
CC	GO:0005618	cell wall	IEP	Predicted GO
BP	GO:0009719	response to endogenous stimulus	IEP	Predicted GO
BP	GO:0009725	response to hormone	IEP	Predicted GO
BP	GO:0009733	response to auxin	IEP	Predicted GO
BP	GO:0010033	response to organic substance	IEP	Predicted GO
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Predicted GO
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Predicted GO
CC	GO:0030312	external encapsulating structure	IEP	Predicted GO
BP	GO:0042221	response to chemical	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
CC	GO:0048046	apoplast	IEP	Predicted GO
MF	GO:0061630	ubiquitin protein ligase activity	IEP	Predicted GO
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	Predicted GO
MF	GO:0140110	transcription regulator activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	19	143

External Links

No external refs found!

Sobic.001G040200.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation