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  5. Sobic.001G153600.1

Sobic.001G153600.1


Description : Unknown function


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G153600.1
Cluster HCAA Clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
A4A49_05033 No alias protein argonaute 16 0.03 Orthogroups_2024-Update
Bradi1g28260 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.02 Orthogroups_2024-Update
Glyma.16G217300 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.03 Orthogroups_2024-Update
HORVU2Hr1G098620.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G103840.26 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00014451-RA No alias (at1g69440 : 623.0) Encodes ARGONAUTE7, a member of the... 0.02 Orthogroups_2024-Update
Pp1s7_194V6 No alias argonaute protein group 0.03 Orthogroups_2024-Update
Seita.2G148000.1 No alias siRNA-integrating factor *(AGO) 0.03 Orthogroups_2024-Update
Seita.3G070600.1 No alias miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 Orthogroups_2024-Update
Sopen02g018420 No alias Piwi domain 0.02 Orthogroups_2024-Update
Sopen06g031140 No alias Piwi domain 0.03 Orthogroups_2024-Update
Sopen12g002750 No alias Piwi domain 0.04 Orthogroups_2024-Update
evm.model.contig_2082.8 No alias (at1g48410 : 352.0) Encodes an RNA Slicer that... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
CC GO:0000808 origin recognition complex IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0004565 beta-galactosidase activity IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005778 peroxisomal membrane IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
CC GO:0009341 beta-galactosidase complex IEP Predicted GO
MF GO:0015925 galactosidase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
CC GO:0031903 microbody membrane IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003165 Piwi 586 889
IPR014811 ArgoL1 265 295
IPR032474 Argonaute_N 110 241
IPR032473 Argonaute_Mid_dom 495 571
IPR003100 PAZ_dom 311 427
No external refs found!