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  5. Sobic.001G247900.1

Sobic.001G247900.1


Description : 2S globulin seed storage protein


Gene families : OG_42_0001384 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001384_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G247900.1
Cluster HCAA Clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Bradi3g26850 No alias Function unknown 0.04 Orthogroups_2024-Update
GRMZM2G403475 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.13G330800 No alias Function unknown 0.04 Orthogroups_2024-Update
LOC_Os10g28050 No alias chitinase 2, putative, expressed 0.02 Orthogroups_2024-Update
MA_10427109g0010 No alias (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00004252-RA No alias (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00004634-RA No alias (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00004635-RA No alias (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00004638-RA No alias (original description: no original description) 0.06 Orthogroups_2024-Update
PSME_00005792-RA No alias (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00005793-RA No alias (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00033867-RA No alias (original description: no original description) 0.13 Orthogroups_2024-Update
Potri.015G100500 No alias Function unknown 0.02 Orthogroups_2024-Update
Solyc11g005890 No alias Chitinase 1, putative (AHRD V3.3 *** B9RU38_RICCO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 93 224
No external refs found!