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  5. Sobic.001G282700.1

Sobic.001G282700.1


Description : calcium-permeable channel *(OSCA)


Gene families : OG_42_0000192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G282700.1
Cluster HCAA Clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
A4A49_19997 No alias csc1-like protein 0.03 Orthogroups_2024-Update
At1g11960 No alias Hyperosmolality-gated Ca2+ permeable channel 1.3... 0.03 Orthogroups_2024-Update
At1g30360 No alias Hyperosmolality-gated Ca2+ permeable channel 3.1... 0.03 Orthogroups_2024-Update
At1g32090 No alias Hyperosmolality-gated Ca2+ permeable channel 1.8... 0.03 Orthogroups_2024-Update
At3g54510 No alias Hyperosmolality-gated Ca2+ permeable channel 2.5... 0.03 Orthogroups_2024-Update
Bradi1g58380 No alias Early-responsive to dehydration stress protein (ERD4) 0.03 Orthogroups_2024-Update
Brara.C02960.1 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
GRMZM2G456000 No alias ERD (early-responsive to dehydration stress) family protein 0.05 Orthogroups_2024-Update
GRMZM6G732597 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 Orthogroups_2024-Update
Glyma.15G091600 No alias Early-responsive to dehydration stress protein (ERD4) 0.03 Orthogroups_2024-Update
HORVU3Hr1G107240.1 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
Kfl00551_0030 kfl00551_0030_v1.1 (at1g30360 : 436.0) early-responsive to dehydration 4... 0.02 Orthogroups_2024-Update
MA_99251g0010 No alias (at1g30360 : 376.0) early-responsive to dehydration 4... 0.03 Orthogroups_2024-Update
Potri.003G200900 No alias Early-responsive to dehydration stress protein (ERD4) 0.03 Orthogroups_2024-Update
Potri.014G156100 No alias ERD (early-responsive to dehydration stress) family protein 0.02 Orthogroups_2024-Update
Pp1s127_53V6 No alias early-responsive to dehydration erd 0.03 Orthogroups_2024-Update
Sobic.001G140000.1 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
Solyc02g081030 No alias ERD (early-responsive to dehydration stress) family... 0.02 Orthogroups_2024-Update
Solyc08g076310 No alias ERD (Early-responsive to dehydration stress) family... 0.03 Orthogroups_2024-Update
Solyc12g088230 No alias mitochondrial malate dehydrogenase 0.02 Orthogroups_2024-Update
Sopen12g030230 No alias Domain of unknown function DUF221 0.03 Orthogroups_2024-Update
evm.model.tig00000655.11 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
InterPro domains Description Start Stop
IPR027815 PHM7_cyt 199 361
IPR032880 Csc1_N 7 178
IPR003864 RSN1_7TM 372 644
No external refs found!