Sobic.001G322200.1


Description : Unknown function


Gene families : OG_42_0000365 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000365_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G322200.1
Cluster HCAA Clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
At5g22460 No alias Alpha/beta-Hydrolases superfamily protein... 0.03 Orthogroups_2024-Update
Bradi3g44867 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g42337 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Bradi5g09290 No alias alpha/beta-Hydrolases superfamily protein 0.05 Orthogroups_2024-Update
Brara.B00973.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.F02158.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G092021 No alias alpha/beta-Hydrolases superfamily protein 0.04 Orthogroups_2024-Update
Glyma.10G111700 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G184366 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G009000 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G033060.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g32970 No alias hydrolase, alpha/beta fold family protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g33590 No alias hydrolase, alpha/beta fold family protein, putative, expressed 0.04 Orthogroups_2024-Update
MA_26805g0010 No alias (at2g36290 : 414.0) alpha/beta-Hydrolases superfamily... 0.03 Orthogroups_2024-Update
Potri.004G203700 No alias alpha/beta-Hydrolases superfamily protein 0.04 Orthogroups_2024-Update
Pp1s155_86V6 No alias contains ESTs AU096327(S13491),AU070375(S13491) similar... 0.03 Orthogroups_2024-Update
Seita.1G180500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G568000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc11g007030 No alias alpha/beta-Hydrolases superfamily protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen09g004250 No alias Alpha/beta hydrolase family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 94 349
No external refs found!