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  5. Sobic.001G361900.1

Sobic.001G361900.1


Description : Unknown function


Gene families : OG_42_0000080 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G361900.1
Cluster HCAA Clusters: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Brara.F03143.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.12G229000 No alias cytochrome BC1 synthesis 0.03 Orthogroups_2024-Update
Glyma.19G018600 No alias AAA-ATPase 1 0.03 Orthogroups_2024-Update
LOC_Os03g38800 No alias AAA family ATPase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G231200 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Potri.004G012500 No alias AAA-ATPase 1 0.02 Orthogroups_2024-Update
Potri.T171900 No alias cytochrome BC1 synthesis 0.03 Orthogroups_2024-Update
Sobic.009G252400.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.009G252600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc05g007470 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
MF GO:0016887 ATPase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0043484 regulation of RNA splicing IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0050684 regulation of mRNA processing IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903311 regulation of mRNA metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 38 136
IPR003959 ATPase_AAA_core 348 416
IPR003959 ATPase_AAA_core 264 327
No external refs found!