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  5. Sobic.001G426400.1

Sobic.001G426400.1


Description : Unknown function


Gene families : OG_42_0004637 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G426400.1
Cluster HCAA Clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
85007 No alias maternal effect embryo arrest 59 0.03 Orthogroups_2024-Update
A4A49_05891 No alias hypothetical protein 0.04 Orthogroups_2024-Update
Bradi1g67120 No alias maternal effect embryo arrest 59 0.04 Orthogroups_2024-Update
Glyma.08G334500 No alias maternal effect embryo arrest 59 0.03 Orthogroups_2024-Update
Glyma.18G067500 No alias maternal effect embryo arrest 59 0.02 Orthogroups_2024-Update
LOC_Os03g15920 No alias expressed protein 0.02 Orthogroups_2024-Update
Pp1s114_70V6 No alias at4g37300 c7a10_60 0.02 Orthogroups_2024-Update
Pp1s82_104V6 No alias at4g37300 c7a10_60 0.02 Orthogroups_2024-Update
Seita.9G457700.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Solyc06g006000 No alias Maternal effect embryo arrest 59 (AHRD V3.3 *** A0A061GXA8_THECC) 0.03 Orthogroups_2024-Update
Sopen06g001980 No alias hypothetical protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!