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  5. Sobic.001G480400.1

Sobic.001G480400.1


Description : night-time repressor *(COR27)


Gene families : OG_42_0003967 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003967_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G480400.1
Cluster HCAA Clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
448001 No alias cold regulated gene 27 0.05 Orthogroups_2024-Update
At4g33980 No alias BEST Arabidopsis thaliana protein match is: cold... 0.05 Orthogroups_2024-Update
At5g42900 No alias Cold regulated protein 27 [Source:UniProtKB/TrEMBL;Acc:Q8L8T7] 0.04 Orthogroups_2024-Update
Bradi1g72390 No alias cold regulated gene 27 0.05 Orthogroups_2024-Update
Brara.H01237.1 No alias night-time repressor *(COR27) 0.04 Orthogroups_2024-Update
GRMZM2G130232 No alias Function unknown 0.05 Orthogroups_2024-Update
GRMZM5G815358 No alias cold regulated gene 27 0.05 Orthogroups_2024-Update
Glyma.14G083000 No alias cold regulated gene 27 0.05 Orthogroups_2024-Update
Glyma.17G242100 No alias cold regulated gene 27 0.03 Orthogroups_2024-Update
HORVU4Hr1G077480.3 No alias night-time repressor *(COR27) 0.03 Orthogroups_2024-Update
HORVU4Hr1G089560.2 No alias night-time repressor *(COR27) 0.03 Orthogroups_2024-Update
LOC_Os03g08580 No alias expressed protein 0.03 Orthogroups_2024-Update
MA_48561g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.002G125900 No alias cold regulated gene 27 0.04 Orthogroups_2024-Update
Potri.009G101400 No alias cold regulated gene 27 0.02 Orthogroups_2024-Update
Potri.014G029000 No alias cold regulated gene 27 0.04 Orthogroups_2024-Update
Seita.9G250300.1 No alias night-time repressor *(COR27) 0.03 Orthogroups_2024-Update
Seita.9G515800.1 No alias night-time repressor *(COR27) 0.06 Orthogroups_2024-Update
Solyc04g078880 No alias Cold regulated gene 27, putative isoform 1 (AHRD V3.3... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009092 homoserine metabolic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019346 transsulfuration IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050667 homocysteine metabolic process IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!