Sobic.001G530900.1


Description : Unknown function


Gene families : OG_42_0003458 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003458_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G530900.1
Cluster HCAA Clusters: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Bradi3g18120 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.09G202500 No alias Function unknown 0.04 Orthogroups_2024-Update
Seita.9G083900.1 No alias regulatory factor *(RP8) of RNA polymerase RpoA activity 0.07 Orthogroups_2024-Update
Solyc04g072400 No alias Plant/F7F23-4 protein (AHRD V3.3 *** G7IJR9_MEDTR) 0.04 Orthogroups_2024-Update
Sopen02g036250 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!