1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At3g45580

At3g45580


Description : RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:Q9M1E9]


Gene families : OG_42_0000330 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g45580
Cluster HCCA clusters: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Bradi4g30420 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.J01382.1 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) 0.04 Orthogroups_2024-Update
Sopen06g001010 No alias IBR domain 0.03 Orthogroups_2024-Update
evm.model.tig00000123.19 No alias (at4g19670 : 110.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
InterPro domains Description Start Stop
IPR002867 IBR_dom 323 369
IPR002867 IBR_dom 247 308
IPR002156 RNaseH_domain 43 155
No external refs found!