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  5. Sobic.002G070200.1

Sobic.002G070200.1


Description : arabinogalactan protein *(Xylogen)


Gene families : OG_42_0001152 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001152_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G070200.1
Cluster HCAA Clusters: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
Brara.D00234.1 No alias arabinogalactan protein *(Xylogen) 0.02 Orthogroups_2024-Update
Glyma.16G186325 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
PSME_00016139-RA No alias (at2g44300 : 127.0) Bifunctional... 0.02 Orthogroups_2024-Update
Seita.9G048200.1 No alias arabinogalactan protein *(Xylogen) 0.03 Orthogroups_2024-Update
Seita.9G527600.1 No alias arabinogalactan protein *(Xylogen) 0.02 Orthogroups_2024-Update
Solyc01g005990 No alias Lipid transfer protein (AHRD V3.3 *** A0A072TPI6_MEDTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 33 117
No external refs found!