Sobic.002G212000.1

Description : subgroup ERF-VII transcription factor & transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.002G212000.1
Cluster	HCAA Clusters: Cluster_58

Target	Alias	Description	ECC score	Gene Family Method
A4A49_02884	No alias	ethylene-responsive transcription factor 14	0.03	Orthogroups_2024-Update
A4A49_03629	No alias	dehydration-responsive element-binding protein 3	0.03	Orthogroups_2024-Update
A4A49_16579	No alias	ethylene-responsive transcription factor abr1	0.03	Orthogroups_2024-Update
A4A49_17723	No alias	ethylene-responsive transcription factor 1	0.02	Orthogroups_2024-Update
A4A49_35008	No alias	dehydration-responsive element-binding protein 3	0.02	Orthogroups_2024-Update
A4A49_36078	No alias	ethylene-responsive transcription factor 5	0.02	Orthogroups_2024-Update
A4A49_36962	No alias	ethylene-responsive transcription factor erf003	0.03	Orthogroups_2024-Update
AC206951.3_FG016	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
At1g22985	No alias	CRF7 [Source:UniProtKB/TrEMBL;Acc:A0A178W874]	0.02	Orthogroups_2024-Update
At3g16280	No alias	Integrase-type DNA-binding superfamily protein...	0.02	Orthogroups_2024-Update
At3g57600	No alias	Dehydration-responsive element-binding protein 2F...	0.03	Orthogroups_2024-Update
At4g16750	No alias	Ethylene-responsive transcription factor ERF039...	0.03	Orthogroups_2024-Update
At4g25480	No alias	Dehydration-responsive element-binding protein 1A...	0.03	Orthogroups_2024-Update
At4g31060	No alias	Ethylene-responsive transcription factor ERF015...	0.02	Orthogroups_2024-Update
At4g39780	No alias	Ethylene-responsive transcription factor ERF060...	0.03	Orthogroups_2024-Update
At5g18560	No alias	PUCHI [Source:UniProtKB/TrEMBL;Acc:A0A178URC3]	0.02	Orthogroups_2024-Update
At5g19790	No alias	Ethylene-responsive transcription factor RAP2-11...	0.03	Orthogroups_2024-Update
Bradi1g46690	No alias	related to AP2 12	0.02	Orthogroups_2024-Update
Bradi3g50620	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Brara.A00041.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.B00415.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.C01524.1	No alias	transcription factor *(CBF/DREB1) & subgroup ERF-III...	0.03	Orthogroups_2024-Update
Brara.D02449.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.02	Orthogroups_2024-Update
Brara.G01052.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.G02121.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.G03123.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.02	Orthogroups_2024-Update
Brara.H00930.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Brara.H01496.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.H01777.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.I03088.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Brara.I04678.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.K00718.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.02	Orthogroups_2024-Update
Cre07.g353500	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G053503	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G066158	No alias	ERF domain protein 12	0.03	Orthogroups_2024-Update
GRMZM2G111415	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G135452	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM5G852704	No alias	related to AP2 4	0.02	Orthogroups_2024-Update
Glyma.01G232000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.02G066200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.03G017300	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Glyma.06G105000	No alias	related to AP2 4	0.03	Orthogroups_2024-Update
Glyma.06G301300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.07G044300	No alias	related to AP2 12	0.03	Orthogroups_2024-Update
Glyma.08G216600	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.10G007000	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Glyma.10G239300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.16G040000	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.19G164100	No alias	ethylene response factor 1	0.01	Orthogroups_2024-Update
Glyma.20G070100	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
HORVU1Hr1G048870.1	No alias	subgroup ERF-III transcription factor	0.01	Orthogroups_2024-Update
HORVU1Hr1G055710.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
HORVU2Hr1G037540.1	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.02	Orthogroups_2024-Update
HORVU2Hr1G103660.2	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU5Hr1G080340.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU5Hr1G080790.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.02	Orthogroups_2024-Update
HORVU6Hr1G060140.1	No alias	subgroup ERF-I transcription factor	0.04	Orthogroups_2024-Update
HORVU6Hr1G065430.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
HORVU6Hr1G090800.2	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.03	Orthogroups_2024-Update
HORVU7Hr1G037180.1	No alias	subgroup ERF-I transcription factor	0.04	Orthogroups_2024-Update
LOC_Os02g38090	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g08470	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g08490	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g27930	No alias	AP2 domain containing protein, expressed	0.05	Orthogroups_2024-Update
LOC_Os05g37640	No alias	expressed protein	0.03	Orthogroups_2024-Update
LOC_Os07g22730	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os09g11460	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os09g39850	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_10343854g0010	No alias	(at1g74930 : 110.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_356609g0010	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
MA_896002g0010	No alias	(at5g11590 : 147.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00004891-RA	No alias	(at1g74930 : 122.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00007051-RA	No alias	(at1g74930 : 102.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00042940-RA	No alias	(at1g53910 : 121.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00050134-RA	No alias	(at5g19790 : 92.0) encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
PSME_00051455-RA	No alias	(at5g21960 : 102.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00052064-RA	No alias	(at5g21960 : 132.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Potri.002G124000	No alias	related to AP2 1	0.02	Orthogroups_2024-Update
Potri.007G043400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.010G006800	No alias	ethylene-responsive element binding protein	0.04	Orthogroups_2024-Update
Potri.015G023200	No alias	cytokinin response factor 4	0.04	Orthogroups_2024-Update
Potri.016G018600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.016G126100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.017G013700	No alias	erf domain protein 9	0.03	Orthogroups_2024-Update
Potri.019G131300	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Pp1s340_16V6	No alias	ethylene-responsive transcription	0.02	Orthogroups_2024-Update
Pp1s67_144V6	No alias	ap2 domain transcription factor	0.02	Orthogroups_2024-Update
Seita.1G248300.1	No alias	subgroup ERF-I transcription factor	0.07	Orthogroups_2024-Update
Seita.1G257300.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Seita.2G215500.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.07	Orthogroups_2024-Update
Seita.2G430400.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Seita.3G281000.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.04	Orthogroups_2024-Update
Seita.3G289200.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.05	Orthogroups_2024-Update
Seita.6G227100.1	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Seita.8G098100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.9G500100.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Sobic.004G171300.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.006G184700.1	No alias	subgroup ERF-III transcription factor	0.01	Orthogroups_2024-Update
Solyc01g090320	No alias	Ethylene-responsive transcription factor, putative (AHRD...	0.02	Orthogroups_2024-Update
Solyc03g026270	No alias	CBF	0.03	Orthogroups_2024-Update
Solyc08g007230	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Solyc12g042210	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Sopen01g027380	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen02g037700	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen03g024370	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen04g006170	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen05g030590	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen05g030960	No alias	AP2 domain	0.05	Orthogroups_2024-Update
Sopen09g032860	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen12g024030	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004096	catalase activity	IEP	Predicted GO
MF	GO:0004175	endopeptidase activity	IEP	Predicted GO
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Predicted GO
MF	GO:0004222	metalloendopeptidase activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
MF	GO:0008237	metallopeptidase activity	IEP	Predicted GO
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015693	magnesium ion transport	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
MF	GO:0061630	ubiquitin protein ligase activity	IEP	Predicted GO
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	Predicted GO
BP	GO:0070838	divalent metal ion transport	IEP	Predicted GO
BP	GO:0072511	divalent inorganic cation transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	134	183

External Links

No external refs found!

Sobic.002G212000.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation