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  5. Sobic.002G214600.1

Sobic.002G214600.1


Description : Hsp60-co-chaperone *(Hsp20) & auxiliary co-chaperone involved in RuBisCo assembly *(CPN20)


Gene families : OG_42_0002026 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002026_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G214600.1
Cluster HCAA Clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Bradi3g60027 No alias chaperonin 20 0.03 Orthogroups_2024-Update
Brara.B00904.1 No alias auxiliary co-chaperone involved in RuBisCo assembly... 0.03 Orthogroups_2024-Update
Brara.C00948.1 No alias auxiliary co-chaperone involved in RuBisCo assembly... 0.03 Orthogroups_2024-Update
Cre12.g505850 No alias chaperonin 20 0.01 Orthogroups_2024-Update
Seita.4G040000.1 No alias Hsp60-co-chaperone *(Hsp20) & auxiliary co-chaperone... 0.04 Orthogroups_2024-Update
Solyc07g042250 No alias chaperonin 21 precursor 0.03 Orthogroups_2024-Update
Solyc12g009250 No alias Chaperonin (AHRD V3.3 *** Q69QD5_ORYSJ) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
BP GO:0006457 protein folding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0004109 coproporphyrinogen oxidase activity IEP Predicted GO
MF GO:0004325 ferrochelatase activity IEP Predicted GO
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR020818 Chaperonin_GroES 55 144
IPR020818 Chaperonin_GroES 153 243
No external refs found!