Coexpression cluster: Cluster_6 (HCAA Clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034641 cellular nitrogen compound metabolic process 13.22% (23/174) 2.16 0.0 1e-06
GO:0046483 heterocycle metabolic process 9.77% (17/174) 2.2 0.0 3e-05
GO:1901360 organic cyclic compound metabolic process 9.77% (17/174) 2.15 0.0 3.6e-05
GO:0006725 cellular aromatic compound metabolic process 9.77% (17/174) 2.2 0.0 4.5e-05
GO:0016070 RNA metabolic process 6.9% (12/174) 2.65 1e-06 4.9e-05
GO:0044271 cellular nitrogen compound biosynthetic process 8.05% (14/174) 2.31 1e-06 7.4e-05
GO:0006139 nucleobase-containing compound metabolic process 8.05% (14/174) 2.08 7e-06 0.000422
GO:0090304 nucleic acid metabolic process 6.9% (12/174) 2.23 1.1e-05 0.000579
GO:1901566 organonitrogen compound biosynthetic process 6.32% (11/174) 2.24 2.6e-05 0.001198
GO:0006457 protein folding 2.3% (4/174) 4.33 4.7e-05 0.001642
GO:0034660 ncRNA metabolic process 3.45% (6/174) 3.27 4e-05 0.001685
GO:0140101 catalytic activity, acting on a tRNA 2.87% (5/174) 3.69 4.5e-05 0.00172
GO:0006399 tRNA metabolic process 2.87% (5/174) 3.6 6.1e-05 0.001977
GO:0033014 tetrapyrrole biosynthetic process 1.72% (3/174) 5.11 8.4e-05 0.002364
GO:0044249 cellular biosynthetic process 8.05% (14/174) 1.75 8.1e-05 0.002451
GO:0019438 aromatic compound biosynthetic process 4.6% (8/174) 2.49 0.000102 0.002681
GO:0035639 purine ribonucleoside triphosphate binding 12.64% (22/174) 1.28 0.000116 0.002875
GO:0018130 heterocycle biosynthetic process 4.6% (8/174) 2.45 0.000123 0.002893
GO:0003723 RNA binding 6.32% (11/174) 1.97 0.000133 0.002948
GO:1901576 organic substance biosynthetic process 8.05% (14/174) 1.65 0.000174 0.003063
GO:0043038 amino acid activation 2.3% (4/174) 3.86 0.000169 0.003104
GO:0043039 tRNA aminoacylation 2.3% (4/174) 3.86 0.000169 0.003104
GO:0016875 ligase activity, forming carbon-oxygen bonds 2.3% (4/174) 3.86 0.000169 0.003104
GO:0004812 aminoacyl-tRNA ligase activity 2.3% (4/174) 3.86 0.000169 0.003104
GO:0033013 tetrapyrrole metabolic process 1.72% (3/174) 4.74 0.000187 0.003153
GO:1901363 heterocyclic compound binding 23.56% (41/174) 0.8 0.000247 0.003868
GO:0097159 organic cyclic compound binding 23.56% (41/174) 0.8 0.000247 0.003868
GO:1901362 organic cyclic compound biosynthetic process 4.6% (8/174) 2.28 0.000263 0.003966
GO:1901265 nucleoside phosphate binding 14.37% (25/174) 1.08 0.000304 0.004275
GO:0000166 nucleotide binding 14.37% (25/174) 1.08 0.000304 0.004275
GO:0000049 tRNA binding 1.15% (2/174) 6.03 0.000382 0.005207
GO:0008104 protein localization 2.87% (5/174) 2.94 0.000519 0.005213
GO:0033036 macromolecule localization 2.87% (5/174) 2.94 0.000519 0.005213
GO:0042886 amide transport 2.87% (5/174) 3.0 0.000432 0.005368
GO:0015833 peptide transport 2.87% (5/174) 3.0 0.000432 0.005368
GO:0015031 protein transport 2.87% (5/174) 3.0 0.000432 0.005368
GO:0032553 ribonucleotide binding 13.22% (23/174) 1.09 0.000516 0.005446
GO:0009058 biosynthetic process 8.05% (14/174) 1.49 0.000504 0.005458
GO:0032555 purine ribonucleotide binding 13.22% (23/174) 1.1 0.000453 0.005461
GO:0097367 carbohydrate derivative binding 13.22% (23/174) 1.08 0.000561 0.00551
GO:0045184 establishment of protein localization 2.87% (5/174) 2.95 0.000501 0.005559
GO:0017076 purine nucleotide binding 13.22% (23/174) 1.1 0.000477 0.005596
GO:0036094 small molecule binding 14.37% (25/174) 1.04 0.000496 0.005661
GO:0009987 cellular process 18.97% (33/174) 0.83 0.0008 0.007669
GO:0140098 catalytic activity, acting on RNA 3.45% (6/174) 2.45 0.000856 0.008028
GO:0006779 porphyrin-containing compound biosynthetic process 1.15% (2/174) 5.45 0.000909 0.008337
GO:0006396 RNA processing 2.87% (5/174) 2.67 0.001192 0.010705
GO:0005524 ATP binding 10.34% (18/174) 1.16 0.00126 0.011079
GO:0071705 nitrogen compound transport 2.87% (5/174) 2.62 0.001412 0.01216
GO:0016874 ligase activity 2.3% (4/174) 3.05 0.001448 0.012223
GO:0044281 small molecule metabolic process 4.6% (8/174) 1.89 0.001548 0.012805
GO:0071702 organic substance transport 2.87% (5/174) 2.51 0.001939 0.015737
GO:0008144 drug binding 10.34% (18/174) 1.09 0.002163 0.017221
GO:0006418 tRNA aminoacylation for protein translation 1.72% (3/174) 3.53 0.002266 0.017389
GO:0006778 porphyrin-containing compound metabolic process 1.15% (2/174) 4.81 0.002259 0.017653
GO:0043043 peptide biosynthetic process 3.45% (6/174) 2.16 0.00238 0.017935
GO:0043168 anion binding 13.22% (23/174) 0.91 0.002596 0.01922
GO:0044237 cellular metabolic process 16.09% (28/174) 0.8 0.002666 0.019394
GO:0043604 amide biosynthetic process 3.45% (6/174) 2.1 0.002914 0.020845
GO:0009059 macromolecule biosynthetic process 4.6% (8/174) 1.72 0.003158 0.022213
GO:0006518 peptide metabolic process 3.45% (6/174) 2.07 0.003241 0.022423
GO:0032559 adenyl ribonucleotide binding 10.92% (19/174) 0.97 0.003958 0.026937
GO:0030554 adenyl nucleotide binding 10.92% (19/174) 0.97 0.004048 0.027112
GO:1990904 ribonucleoprotein complex 3.45% (6/174) 1.99 0.004316 0.028021
GO:0006520 cellular amino acid metabolic process 2.3% (4/174) 2.62 0.004263 0.028109
GO:0043603 cellular amide metabolic process 3.45% (6/174) 1.97 0.00453 0.028966
GO:0004655 porphobilinogen synthase activity 0.57% (1/174) 7.62 0.005098 0.030735
GO:0006423 cysteinyl-tRNA aminoacylation 0.57% (1/174) 7.62 0.005098 0.030735
GO:0004817 cysteine-tRNA ligase activity 0.57% (1/174) 7.62 0.005098 0.030735
GO:0006450 regulation of translational fidelity 0.57% (1/174) 7.62 0.005098 0.030735
GO:0008152 metabolic process 18.97% (33/174) 0.64 0.006118 0.036363
GO:0043167 ion binding 17.82% (31/174) 0.66 0.00662 0.038803
GO:0034654 nucleobase-containing compound biosynthetic process 2.87% (5/174) 2.09 0.006773 0.039154
GO:0034645 cellular macromolecule biosynthetic process 4.02% (7/174) 1.67 0.006925 0.039491
GO:0071704 organic substance metabolic process 17.82% (31/174) 0.65 0.007415 0.041721
GO:0003676 nucleic acid binding 10.34% (18/174) 0.9 0.008104 0.044996
GO:0005488 binding 30.46% (53/174) 0.44 0.00864 0.047351
GO:0051188 cofactor biosynthetic process 1.72% (3/174) 2.83 0.00888 0.048043
GO:2001020 regulation of response to DNA damage stimulus 0.57% (1/174) 6.62 0.010171 0.048773
GO:0004109 coproporphyrinogen oxidase activity 0.57% (1/174) 6.62 0.010171 0.048773
GO:0051920 peroxiredoxin activity 0.57% (1/174) 6.62 0.010171 0.048773
GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity 0.57% (1/174) 6.62 0.010171 0.048773
GO:0006282 regulation of DNA repair 0.57% (1/174) 6.62 0.010171 0.048773
GO:0003937 IMP cyclohydrolase activity 0.57% (1/174) 6.62 0.010171 0.048773
GO:0006359 regulation of transcription by RNA polymerase III 0.57% (1/174) 6.62 0.010171 0.048773
GO:0016480 negative regulation of transcription by RNA polymerase III 0.57% (1/174) 6.62 0.010171 0.048773
GO:0006412 translation 2.87% (5/174) 1.93 0.010443 0.049516
GO:0006807 nitrogen compound metabolic process 14.37% (25/174) 0.7 0.010653 0.049951
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_1 0.036 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_38 0.023 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_43 0.066 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_76 0.031 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_152 0.04 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_176 0.024 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_248 0.029 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_11 0.03 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_14 0.026 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_37 0.055 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_46 0.027 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_57 0.032 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_71 0.042 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_110 0.027 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_122 0.031 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_125 0.051 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_149 0.034 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_162 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_243 0.031 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_19 0.025 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_25 0.026 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_54 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_56 0.033 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_59 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_95 0.024 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_115 0.024 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_118 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_155 0.023 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_156 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_177 0.026 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_12 0.073 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_31 0.034 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_74 0.022 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_83 0.03 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_20 0.031 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_61 0.023 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_3 0.023 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_23 0.022 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_80 0.035 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_197 0.025 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_15 0.022 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_37 0.051 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_103 0.026 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_118 0.021 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_137 0.048 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_141 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_173 0.021 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_1 0.026 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_45 0.031 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_18 0.022 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_23 0.024 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_25 0.022 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_67 0.026 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_204 0.026 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_210 0.032 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_16 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_47 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_160 0.022 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_229 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_41 0.088 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_53 0.028 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_71 0.066 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_80 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_121 0.04 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_132 0.05 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_160 0.037 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_187 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_203 0.043 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_236 0.039 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_109 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_158 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_173 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_311 0.032 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_338 0.031 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_385 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_417 0.029 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_441 0.032 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_442 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_459 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_464 0.025 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_39 0.022 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_53 0.034 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_119 0.025 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_23 0.032 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_79 0.022 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_117 0.031 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_56 0.047 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_90 0.023 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_107 0.05 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_153 0.024 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_186 0.034 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0005 0.033 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0045 0.021 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0048 0.02 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0086 0.033 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0112 0.034 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0119 0.028 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0024 0.025 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0030 0.03 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0035 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0036 0.054 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0050 0.063 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0059 0.026 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0083 0.026 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0138 0.029 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_23 0.084 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_30 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_57 0.037 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_66 0.044 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_82 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_118 0.038 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_133 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_158 0.041 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_212 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_264 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_314 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_390 0.028 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_26 0.023 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_45 0.039 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_66 0.031 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_86 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_101 0.026 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_158 0.031 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_204 0.027 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_217 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_300 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_56 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_63 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_87 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_3 0.11 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_31 0.025 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_33 0.043 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_34 0.1 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_54 0.028 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_110 0.028 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_161 0.077 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_8 0.029 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_19 0.021 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_51 0.026 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_63 0.019 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_81 0.021 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_106 0.028 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_122 0.022 Orthogroups_2024-Update Compare
Sequences (174) (download table)

InterPro Domains

GO Terms

Family Terms