Coexpression cluster: Cluster_18 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 53.12% (136/256) 0.54 0.0 2.4e-05
GO:0006139 nucleobase-containing compound metabolic process 8.98% (23/256) 1.85 0.0 4.1e-05
GO:0046483 heterocycle metabolic process 9.38% (24/256) 1.74 0.0 5.8e-05
GO:1901360 organic cyclic compound metabolic process 9.38% (24/256) 1.7 0.0 6.7e-05
GO:0006725 cellular aromatic compound metabolic process 8.98% (23/256) 1.68 1e-06 9.9e-05
GO:0034641 cellular nitrogen compound metabolic process 10.55% (27/256) 1.52 1e-06 0.00011
GO:0009058 biosynthetic process 8.59% (22/256) 1.49 1.5e-05 0.00128
GO:0044237 cellular metabolic process 17.97% (46/256) 0.91 2.3e-05 0.001717
GO:0044464 cell part 9.77% (25/256) 1.3 3.4e-05 0.002241
GO:0008152 metabolic process 26.95% (69/256) 0.64 7e-05 0.002333
GO:0071704 organic substance metabolic process 20.31% (52/256) 0.78 6.8e-05 0.002381
GO:0090407 organophosphate biosynthetic process 3.12% (8/256) 2.66 4.1e-05 0.002431
GO:0044238 primary metabolic process 19.53% (50/256) 0.8 6.7e-05 0.002508
GO:0090304 nucleic acid metabolic process 6.25% (16/256) 1.66 5.7e-05 0.002644
GO:0006807 nitrogen compound metabolic process 17.19% (44/256) 0.87 6.7e-05 0.002661
GO:0009987 cellular process 19.92% (51/256) 0.79 6.4e-05 0.002743
GO:0140098 catalytic activity, acting on RNA 3.52% (9/256) 2.32 8.7e-05 0.002756
GO:0044249 cellular biosynthetic process 7.42% (19/256) 1.49 5.7e-05 0.002845
GO:0005488 binding 30.86% (79/256) 0.56 0.000105 0.002988
GO:0019637 organophosphate metabolic process 3.52% (9/256) 2.4 5.5e-05 0.003015
GO:1901576 organic substance biosynthetic process 7.42% (19/256) 1.42 0.000105 0.003137
GO:0044424 intracellular part 8.59% (22/256) 1.23 0.000192 0.00524
GO:0009165 nucleotide biosynthetic process 2.34% (6/256) 2.78 0.000242 0.005573
GO:1901293 nucleoside phosphate biosynthetic process 2.34% (6/256) 2.78 0.000242 0.005573
GO:1901137 carbohydrate derivative biosynthetic process 2.34% (6/256) 2.76 0.00026 0.005765
GO:0044281 small molecule metabolic process 5.08% (13/256) 1.69 0.000221 0.005767
GO:0055086 nucleobase-containing small molecule metabolic process 2.73% (7/256) 2.51 0.000239 0.005962
GO:0016070 RNA metabolic process 4.69% (12/256) 1.74 0.000289 0.006184
GO:0003676 nucleic acid binding 9.38% (24/256) 1.11 0.000357 0.007136
GO:0034660 ncRNA metabolic process 2.73% (7/256) 2.42 0.000352 0.007275
GO:0046040 IMP metabolic process 0.78% (2/256) 5.86 0.000391 0.007326
GO:0006188 IMP biosynthetic process 0.78% (2/256) 5.86 0.000391 0.007326
GO:1990234 transferase complex 1.56% (4/256) 3.49 0.000419 0.007611
GO:0009117 nucleotide metabolic process 2.34% (6/256) 2.52 0.000639 0.010941
GO:0006164 purine nucleotide biosynthetic process 1.95% (5/256) 2.86 0.000628 0.011059
GO:0043227 membrane-bounded organelle 3.52% (9/256) 1.89 0.000779 0.011959
GO:0043231 intracellular membrane-bounded organelle 3.52% (9/256) 1.89 0.000779 0.011959
GO:0006753 nucleoside phosphate metabolic process 2.34% (6/256) 2.47 0.000759 0.012287
GO:0008173 RNA methyltransferase activity 1.17% (3/256) 4.03 0.000751 0.012497
GO:0072522 purine-containing compound biosynthetic process 1.95% (5/256) 2.77 0.000844 0.012644
GO:1901135 carbohydrate derivative metabolic process 2.73% (7/256) 2.16 0.00101 0.013748
GO:0016741 transferase activity, transferring one-carbon groups 3.12% (8/256) 1.99 0.000971 0.01385
GO:0008150 biological_process 32.42% (83/256) 0.45 0.000952 0.013907
GO:0043229 intracellular organelle 5.08% (13/256) 1.46 0.001 0.013927
GO:0043226 organelle 5.08% (13/256) 1.45 0.001068 0.014212
GO:0017056 structural constituent of nuclear pore 0.78% (2/256) 5.12 0.001285 0.016034
GO:0006163 purine nucleotide metabolic process 1.95% (5/256) 2.64 0.001268 0.016155
GO:0006396 RNA processing 2.73% (7/256) 2.11 0.001246 0.016226
GO:0005575 cellular_component 13.67% (35/256) 0.77 0.001353 0.016536
GO:0043170 macromolecule metabolic process 14.06% (36/256) 0.75 0.001414 0.016944
GO:0072521 purine-containing compound metabolic process 1.95% (5/256) 2.56 0.001626 0.018727
GO:0044428 nuclear part 1.95% (5/256) 2.56 0.001626 0.018727
GO:0008113 peptide-methionine (S)-S-oxide reductase activity 0.78% (2/256) 4.44 0.003516 0.033973
GO:0009127 purine nucleoside monophosphate biosynthetic process 1.56% (4/256) 2.69 0.003429 0.034235
GO:0009124 nucleoside monophosphate biosynthetic process 1.56% (4/256) 2.69 0.003429 0.034235
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 1.56% (4/256) 2.69 0.003429 0.034235
GO:0009156 ribonucleoside monophosphate biosynthetic process 1.56% (4/256) 2.69 0.003429 0.034235
GO:0006364 rRNA processing 1.17% (3/256) 3.33 0.003204 0.034272
GO:0016072 rRNA metabolic process 1.17% (3/256) 3.33 0.003204 0.034272
GO:0032991 protein-containing complex 5.47% (14/256) 1.2 0.003504 0.034411
GO:1901566 organonitrogen compound biosynthetic process 4.3% (11/256) 1.42 0.003069 0.03468
GO:0008168 methyltransferase activity 2.73% (7/256) 1.88 0.003142 0.034858
GO:0000148 1,3-beta-D-glucan synthase complex 0.78% (2/256) 4.27 0.004487 0.035364
GO:0005643 nuclear pore 0.78% (2/256) 4.27 0.004487 0.035364
GO:0003843 1,3-beta-D-glucan synthase activity 0.78% (2/256) 4.27 0.004487 0.035364
GO:0006074 (1->3)-beta-D-glucan metabolic process 0.78% (2/256) 4.27 0.004487 0.035364
GO:0006075 (1->3)-beta-D-glucan biosynthetic process 0.78% (2/256) 4.27 0.004487 0.035364
GO:0004518 nuclease activity 1.56% (4/256) 2.56 0.00472 0.036246
GO:0003824 catalytic activity 28.91% (74/256) 0.4 0.004701 0.036573
GO:0009123 nucleoside monophosphate metabolic process 1.56% (4/256) 2.59 0.004439 0.037452
GO:0046390 ribose phosphate biosynthetic process 1.56% (4/256) 2.59 0.004439 0.037452
GO:0009161 ribonucleoside monophosphate metabolic process 1.56% (4/256) 2.59 0.004439 0.037452
GO:0009167 purine ribonucleoside monophosphate metabolic process 1.56% (4/256) 2.59 0.004439 0.037452
GO:0009260 ribonucleotide biosynthetic process 1.56% (4/256) 2.59 0.004439 0.037452
GO:0009152 purine ribonucleotide biosynthetic process 1.56% (4/256) 2.59 0.004439 0.037452
GO:0009126 purine nucleoside monophosphate metabolic process 1.56% (4/256) 2.59 0.004439 0.037452
GO:0034654 nucleobase-containing compound biosynthetic process 2.73% (7/256) 1.82 0.003944 0.0375
GO:0035639 purine ribonucleoside triphosphate binding 10.16% (26/256) 0.78 0.005149 0.039038
GO:0004386 helicase activity 1.17% (3/256) 3.07 0.005311 0.039762
GO:0005634 nucleus 2.73% (7/256) 1.79 0.004331 0.04054
GO:0034470 ncRNA processing 1.56% (4/256) 2.49 0.005633 0.041146
GO:0051604 protein maturation 0.78% (2/256) 4.12 0.005566 0.041163
GO:0018130 heterocycle biosynthetic process 3.12% (8/256) 1.57 0.005973 0.043106
GO:1901564 organonitrogen compound metabolic process 12.11% (31/256) 0.68 0.006189 0.043614
GO:0043168 anion binding 11.33% (29/256) 0.71 0.006143 0.043803
GO:0032555 purine ribonucleotide binding 10.16% (26/256) 0.76 0.006289 0.043807
GO:0017076 purine nucleotide binding 10.16% (26/256) 0.75 0.00659 0.045373
GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer 0.78% (2/256) 3.98 0.006752 0.04596
GO:0032553 ribonucleotide binding 10.16% (26/256) 0.74 0.007361 0.04954
GO:0016874 ligase activity 1.95% (5/256) 2.04 0.007613 0.049566
GO:0009150 purine ribonucleotide metabolic process 1.56% (4/256) 2.36 0.007796 0.049679
GO:0009259 ribonucleotide metabolic process 1.56% (4/256) 2.36 0.007796 0.049679
GO:0009451 RNA modification 1.17% (3/256) 2.9 0.007477 0.049761
GO:0044271 cellular nitrogen compound biosynthetic process 4.3% (11/256) 1.24 0.007584 0.049923
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_26 0.027 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_43 0.025 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_96 0.022 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_104 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_176 0.024 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_180 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_29 0.028 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_46 0.022 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_122 0.04 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_124 0.034 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_285 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_6 0.041 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_19 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_25 0.023 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_26 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_61 0.023 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_72 0.024 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_73 0.025 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_95 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_127 0.023 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_3 0.02 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_26 0.041 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_99 0.02 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_13 0.021 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_40 0.019 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_69 0.02 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_82 0.021 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_46 0.02 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_104 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_136 0.02 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_151 0.031 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_184 0.022 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_205 0.024 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_225 0.023 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_8 0.034 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_38 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_97 0.024 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_59 0.043 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_94 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_121 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_132 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_188 0.023 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_203 0.039 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_226 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_109 0.03 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_116 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_260 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_289 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_385 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_409 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_417 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_420 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_423 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_438 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_444 0.035 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_496 0.023 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_52 0.021 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_13 0.026 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_32 0.02 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_47 0.025 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_59 0.03 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_56 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_73 0.023 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_90 0.024 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_92 0.022 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0017 0.026 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0059 0.023 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0068 0.026 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0083 0.024 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0100 0.023 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0009 0.023 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0027 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0096 0.025 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0105 0.045 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0189 0.027 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_24 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_32 0.027 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_83 0.033 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_101 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_114 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_124 0.026 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_154 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_286 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_28 0.036 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_45 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_117 0.038 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_1 0.025 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_6 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_66 0.045 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_87 0.024 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_144 0.032 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_196 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_216 0.022 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_28 0.036 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_33 0.04 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_34 0.03 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_45 0.026 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_56 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_75 0.028 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_108 0.025 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_191 0.025 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_11 0.025 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_22 0.021 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_114 0.025 Orthogroups_2024-Update Compare
Sequences (256) (download table)

InterPro Domains

GO Terms

Family Terms