Coexpression cluster: Cluster_37 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1990904 ribonucleoprotein complex 29.27% (24/82) 4.44 0.0 0.0
GO:0043043 peptide biosynthetic process 28.05% (23/82) 4.47 0.0 0.0
GO:0003735 structural constituent of ribosome 28.05% (23/82) 4.47 0.0 0.0
GO:0043604 amide biosynthetic process 28.05% (23/82) 4.44 0.0 0.0
GO:0006412 translation 28.05% (23/82) 4.48 0.0 0.0
GO:0005840 ribosome 28.05% (23/82) 4.5 0.0 0.0
GO:0006518 peptide metabolic process 28.05% (23/82) 4.42 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 28.05% (23/82) 4.37 0.0 0.0
GO:0043228 non-membrane-bounded organelle 28.05% (23/82) 4.37 0.0 0.0
GO:0043603 cellular amide metabolic process 28.05% (23/82) 4.37 0.0 0.0
GO:0005198 structural molecule activity 28.05% (23/82) 4.38 0.0 0.0
GO:0044444 cytoplasmic part 30.49% (25/82) 3.85 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 30.49% (25/82) 3.85 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 28.05% (23/82) 3.93 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 35.37% (29/82) 3.23 0.0 0.0
GO:0009059 macromolecule biosynthetic process 28.05% (23/82) 3.84 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 29.27% (24/82) 3.63 0.0 0.0
GO:0043226 organelle 28.05% (23/82) 3.64 0.0 0.0
GO:0043229 intracellular organelle 28.05% (23/82) 3.64 0.0 0.0
GO:0032991 protein-containing complex 30.49% (25/82) 3.29 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 40.24% (33/82) 2.6 0.0 0.0
GO:0044249 cellular biosynthetic process 30.49% (25/82) 3.26 0.0 0.0
GO:0005622 intracellular 19.51% (16/82) 4.61 0.0 0.0
GO:1901576 organic substance biosynthetic process 30.49% (25/82) 3.2 0.0 0.0
GO:0009058 biosynthetic process 30.49% (25/82) 3.08 0.0 0.0
GO:0044464 cell part 32.93% (27/82) 2.87 0.0 0.0
GO:0044424 intracellular part 31.71% (26/82) 2.9 0.0 0.0
GO:0006807 nitrogen compound metabolic process 40.24% (33/82) 2.3 0.0 0.0
GO:0043170 macromolecule metabolic process 37.8% (31/82) 2.4 0.0 0.0
GO:0044267 cellular protein metabolic process 30.49% (25/82) 2.76 0.0 0.0
GO:0019538 protein metabolic process 31.71% (26/82) 2.59 0.0 0.0
GO:0008152 metabolic process 47.56% (39/82) 1.82 0.0 0.0
GO:0044237 cellular metabolic process 39.02% (32/82) 2.12 0.0 0.0
GO:0044238 primary metabolic process 40.24% (33/82) 2.03 0.0 0.0
GO:0009987 cellular process 41.46% (34/82) 1.92 0.0 0.0
GO:0071704 organic substance metabolic process 40.24% (33/82) 1.96 0.0 0.0
GO:0005575 cellular_component 35.37% (29/82) 2.14 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 30.49% (25/82) 2.41 0.0 0.0
GO:0003674 molecular_function 62.2% (51/82) 1.11 0.0 0.0
GO:0008150 biological_process 50.0% (41/82) 1.34 0.0 0.0
GO:0006418 tRNA aminoacylation for protein translation 6.1% (5/82) 5.45 0.0 1e-06
GO:0004812 aminoacyl-tRNA ligase activity 6.1% (5/82) 5.33 0.0 1e-06
GO:0016875 ligase activity, forming carbon-oxygen bonds 6.1% (5/82) 5.33 0.0 1e-06
GO:0043038 amino acid activation 6.1% (5/82) 5.33 0.0 1e-06
GO:0043039 tRNA aminoacylation 6.1% (5/82) 5.33 0.0 1e-06
GO:0016874 ligase activity 7.32% (6/82) 4.3 1e-06 4e-06
GO:0140101 catalytic activity, acting on a tRNA 6.1% (5/82) 4.69 2e-06 9e-06
GO:0006399 tRNA metabolic process 6.1% (5/82) 4.52 3e-06 1.7e-05
GO:0006520 cellular amino acid metabolic process 7.32% (6/82) 3.91 3e-06 1.8e-05
GO:0034660 ncRNA metabolic process 6.1% (5/82) 4.08 1.2e-05 6.9e-05
GO:0019752 carboxylic acid metabolic process 7.32% (6/82) 2.96 0.000128 0.000721
GO:0006082 organic acid metabolic process 7.32% (6/82) 2.92 0.000145 0.000785
GO:0043436 oxoacid metabolic process 7.32% (6/82) 2.93 0.000142 0.000787
GO:0140098 catalytic activity, acting on RNA 6.1% (5/82) 3.26 0.000185 0.000986
GO:0044281 small molecule metabolic process 8.54% (7/82) 2.5 0.000248 0.001298
GO:0003723 RNA binding 6.1% (5/82) 2.73 0.000977 0.005024
GO:0019843 rRNA binding 2.44% (2/82) 5.04 0.001697 0.008577
GO:0016070 RNA metabolic process 6.1% (5/82) 2.33 0.003237 0.016074
GO:0070402 NADPH binding 1.22% (1/82) 7.62 0.005075 0.024775
GO:0003824 catalytic activity 26.83% (22/82) 0.8 0.005391 0.025877
GO:0017007 protein-bilin linkage 1.22% (1/82) 7.04 0.007604 0.03532
GO:0017009 protein-phycocyanobilin linkage 1.22% (1/82) 7.04 0.007604 0.03532
GO:0006139 nucleobase-containing compound metabolic process 7.32% (6/82) 1.73 0.009532 0.043575
GO:0007031 peroxisome organization 1.22% (1/82) 6.62 0.010125 0.044863
GO:0017006 protein-tetrapyrrole linkage 1.22% (1/82) 6.62 0.010125 0.044863
GO:0016491 oxidoreductase activity 8.54% (7/82) 1.54 0.010375 0.045275
GO:0090304 nucleic acid metabolic process 6.1% (5/82) 1.91 0.010941 0.047031
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_1 0.033 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_12 0.027 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_43 0.037 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_76 0.057 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_97 0.02 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_233 0.023 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_248 0.045 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_37 0.149 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_57 0.036 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_163 0.043 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_243 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_34 0.025 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_57 0.023 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_157 0.024 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_12 0.048 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_31 0.081 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_57 0.032 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_147 0.055 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_20 0.054 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_43 0.046 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_52 0.037 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_55 0.025 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_69 0.025 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_3 0.034 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_23 0.037 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_135 0.025 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_15 0.053 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_64 0.022 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_137 0.021 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_164 0.024 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_28 0.025 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_34 0.024 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_46 0.02 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_67 0.051 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_100 0.031 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_210 0.024 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_188 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_234 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_41 0.067 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_53 0.05 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_121 0.025 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_160 0.062 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_187 0.031 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_41 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_115 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_212 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_302 0.034 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_338 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_384 0.047 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_501 0.025 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_53 0.096 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_67 0.023 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_86 0.027 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_23 0.051 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_137 0.024 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_56 0.053 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_107 0.027 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_198 0.024 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0112 0.022 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0030 0.155 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0050 0.044 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0093 0.024 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_23 0.09 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_57 0.032 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_75 0.019 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_113 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_118 0.035 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_202 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_45 0.055 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_101 0.029 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_158 0.071 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_6 0.051 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_56 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_63 0.033 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_116 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_146 0.093 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_148 0.029 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_222 0.033 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_3 0.13 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_34 0.049 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_43 0.034 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_110 0.053 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_5 0.022 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_8 0.02 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_9 0.025 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_19 0.026 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_23 0.05 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_52 0.051 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_81 0.021 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_106 0.024 Orthogroups_2024-Update Compare
Sequences (82) (download table)

InterPro Domains

GO Terms

Family Terms