Coexpression cluster: Cluster_79 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043038 amino acid activation 8.33% (5/60) 5.52 0.0 3e-06
GO:0043039 tRNA aminoacylation 8.33% (5/60) 5.52 0.0 3e-06
GO:0004812 aminoacyl-tRNA ligase activity 8.33% (5/60) 5.52 0.0 3e-06
GO:0016875 ligase activity, forming carbon-oxygen bonds 8.33% (5/60) 5.52 0.0 3e-06
GO:0006418 tRNA aminoacylation for protein translation 8.33% (5/60) 5.62 0.0 9e-06
GO:0140101 catalytic activity, acting on a tRNA 8.33% (5/60) 4.96 1e-06 1.5e-05
GO:0006399 tRNA metabolic process 8.33% (5/60) 4.72 1e-06 3e-05
GO:0016874 ligase activity 8.33% (5/60) 4.32 5e-06 8.4e-05
GO:0006520 cellular amino acid metabolic process 8.33% (5/60) 4.38 4e-06 8.6e-05
GO:0034660 ncRNA metabolic process 8.33% (5/60) 4.33 5e-06 8.9e-05
GO:0043168 anion binding 20.0% (12/60) 2.22 8e-06 0.000112
GO:0043167 ion binding 23.33% (14/60) 1.96 9e-06 0.000122
GO:0036094 small molecule binding 20.0% (12/60) 2.16 1.2e-05 0.000149
GO:0017076 purine nucleotide binding 18.33% (11/60) 2.24 1.7e-05 0.000169
GO:0032555 purine ribonucleotide binding 18.33% (11/60) 2.25 1.6e-05 0.000171
GO:0035639 purine ribonucleoside triphosphate binding 18.33% (11/60) 2.26 1.5e-05 0.000173
GO:0140098 catalytic activity, acting on RNA 8.33% (5/60) 3.91 2.1e-05 0.000177
GO:0097367 carbohydrate derivative binding 18.33% (11/60) 2.21 2.1e-05 0.000185
GO:0019752 carboxylic acid metabolic process 8.33% (5/60) 3.88 2.3e-05 0.000186
GO:0032553 ribonucleotide binding 18.33% (11/60) 2.21 2e-05 0.00019
GO:0043436 oxoacid metabolic process 8.33% (5/60) 3.83 2.7e-05 0.00021
GO:0006082 organic acid metabolic process 8.33% (5/60) 3.81 2.9e-05 0.000214
GO:1901265 nucleoside phosphate binding 18.33% (11/60) 2.09 4.5e-05 0.000288
GO:0000166 nucleotide binding 18.33% (11/60) 2.09 4.5e-05 0.000288
GO:0003674 molecular_function 45.0% (27/60) 1.06 4.4e-05 0.000308
GO:0005488 binding 33.33% (20/60) 1.28 8.9e-05 0.000549
GO:0097159 organic cyclic compound binding 21.67% (13/60) 1.65 0.000193 0.001111
GO:1901363 heterocyclic compound binding 21.67% (13/60) 1.65 0.000193 0.001111
GO:0044281 small molecule metabolic process 10.0% (6/60) 2.76 0.000255 0.001417
GO:0001882 nucleoside binding 6.67% (4/60) 3.62 0.000319 0.001468
GO:0032549 ribonucleoside binding 6.67% (4/60) 3.63 0.00031 0.001468
GO:0032550 purine ribonucleoside binding 6.67% (4/60) 3.63 0.00031 0.001468
GO:0005525 GTP binding 6.67% (4/60) 3.63 0.00031 0.001468
GO:0032561 guanyl ribonucleotide binding 6.67% (4/60) 3.63 0.00031 0.001468
GO:0001883 purine nucleoside binding 6.67% (4/60) 3.63 0.00031 0.001468
GO:0019001 guanyl nucleotide binding 6.67% (4/60) 3.6 0.000338 0.00151
GO:0016070 RNA metabolic process 8.33% (5/60) 3.04 0.000354 0.00154
GO:0008144 drug binding 13.33% (8/60) 1.95 0.001022 0.00433
GO:0003824 catalytic activity 25.0% (15/60) 1.21 0.001453 0.005998
GO:0008152 metabolic process 21.67% (13/60) 1.28 0.002071 0.008335
GO:0043461 proton-transporting ATP synthase complex assembly 1.67% (1/60) 8.69 0.002429 0.009094
GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity 1.67% (1/60) 8.69 0.002429 0.009094
GO:0016744 transferase activity, transferring aldehyde or ketonic groups 1.67% (1/60) 8.69 0.002429 0.009094
GO:0005524 ATP binding 11.67% (7/60) 1.82 0.003506 0.012827
GO:0030554 adenyl nucleotide binding 11.67% (7/60) 1.81 0.003699 0.012945
GO:0032559 adenyl ribonucleotide binding 11.67% (7/60) 1.81 0.00365 0.013057
GO:0001671 ATPase activator activity 1.67% (1/60) 7.69 0.004852 0.015624
GO:0006021 inositol biosynthetic process 1.67% (1/60) 7.69 0.004852 0.015624
GO:0004512 inositol-3-phosphate synthase activity 1.67% (1/60) 7.69 0.004852 0.015624
GO:0006020 inositol metabolic process 1.67% (1/60) 7.69 0.004852 0.015624
GO:0008150 biological_process 26.67% (16/60) 0.97 0.005578 0.017608
GO:0090304 nucleic acid metabolic process 8.33% (5/60) 2.09 0.006434 0.01992
GO:0008610 lipid biosynthetic process 3.33% (2/60) 4.04 0.006594 0.020031
GO:0016872 intramolecular lyase activity 1.67% (1/60) 7.1 0.007269 0.0209
GO:0006721 terpenoid metabolic process 1.67% (1/60) 7.1 0.007269 0.0209
GO:0016114 terpenoid biosynthetic process 1.67% (1/60) 7.1 0.007269 0.0209
GO:0016742 hydroxymethyl-, formyl- and related transferase activity 1.67% (1/60) 6.69 0.009681 0.025978
GO:0070071 proton-transporting two-sector ATPase complex assembly 1.67% (1/60) 6.69 0.009681 0.025978
GO:0051087 chaperone binding 1.67% (1/60) 6.69 0.009681 0.025978
GO:0060590 ATPase regulator activity 1.67% (1/60) 6.69 0.009681 0.025978
GO:0044255 cellular lipid metabolic process 3.33% (2/60) 3.62 0.011592 0.030595
GO:0000049 tRNA binding 1.67% (1/60) 6.1 0.014487 0.036444
GO:0009058 biosynthetic process 8.33% (5/60) 1.8 0.014384 0.036759
GO:0003924 GTPase activity 3.33% (2/60) 3.46 0.01437 0.037315
GO:0008299 isoprenoid biosynthetic process 1.67% (1/60) 5.88 0.016881 0.039969
GO:1901617 organic hydroxy compound biosynthetic process 1.67% (1/60) 5.88 0.016881 0.039969
GO:0046173 polyol biosynthetic process 1.67% (1/60) 5.88 0.016881 0.039969
GO:0046165 alcohol biosynthetic process 1.67% (1/60) 5.88 0.016881 0.039969
GO:0016853 isomerase activity 3.33% (2/60) 3.28 0.018203 0.042473
GO:0019751 polyol metabolic process 1.67% (1/60) 5.69 0.01927 0.04309
GO:0016868 intramolecular transferase activity, phosphotransferases 1.67% (1/60) 5.69 0.01927 0.04309
GO:0006720 isoprenoid metabolic process 1.67% (1/60) 5.69 0.01927 0.04309
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_34 0.025 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_207 0.028 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_238 0.031 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_108 0.024 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_3 0.032 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_15 0.021 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_74 0.033 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_126 0.034 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_54 0.022 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_80 0.019 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_205 0.02 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_233 0.022 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_291 0.038 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_18 0.022 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_136 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_93 0.028 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_71 0.035 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_188 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_130 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_322 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_391 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_203 0.019 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_66 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_259 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_297 0.027 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_6 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_75 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_3 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_172 0.023 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_173 0.024 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_67 0.026 Orthogroups_2024-Update Compare
Sequences (60) (download table)

InterPro Domains

GO Terms

Family Terms