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Description : Unknown function
Gene families : OG_42_0010026 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010026_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor: Sobic.002G251800.2 | |
| Cluster | HCAA Clusters: Cluster_13 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GRMZM2G033884 | No alias | mitochondrial editing factor 18 | 0.04 | Orthogroups_2024-Update | |
| Glyma.15G103100 | No alias | mitochondrial editing factor 18 | 0.02 | Orthogroups_2024-Update | |
| HORVU5Hr1G095110.1 | No alias | RNA editing factor *(MEF18) | 0.03 | Orthogroups_2024-Update | |
| Potri.010G029900 | No alias | mitochondrial editing factor 18 | 0.04 | Orthogroups_2024-Update | |
| Sopen01g031970 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
| MF | GO:0004645 | phosphorylase activity | IEP | Predicted GO |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Predicted GO |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
| BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
| BP | GO:0006281 | DNA repair | IEP | Predicted GO |
| BP | GO:0006298 | mismatch repair | IEP | Predicted GO |
| BP | GO:0006766 | vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0006772 | thiamine metabolic process | IEP | Predicted GO |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predicted GO |
| MF | GO:0008184 | glycogen phosphorylase activity | IEP | Predicted GO |
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Predicted GO |
| BP | GO:0009228 | thiamine biosynthetic process | IEP | Predicted GO |
| MF | GO:0030983 | mismatched DNA binding | IEP | Predicted GO |
| BP | GO:0033554 | cellular response to stress | IEP | Predicted GO |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predicted GO |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043169 | cation binding | IEP | Predicted GO |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Predicted GO |
| MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| BP | GO:0051716 | cellular response to stimulus | IEP | Predicted GO |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 345 | 372 |
| IPR002885 | Pentatricopeptide_repeat | 80 | 104 |
| IPR002885 | Pentatricopeptide_repeat | 211 | 239 |
| IPR002885 | Pentatricopeptide_repeat | 462 | 486 |
| IPR002885 | Pentatricopeptide_repeat | 242 | 269 |
| IPR002885 | Pentatricopeptide_repeat | 110 | 140 |
| IPR002885 | Pentatricopeptide_repeat | 373 | 416 |
| No external refs found! |