1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.002G418500.1

Sobic.002G418500.1


Description : WRKY-type transcription factor


Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G418500.1
Cluster HCAA Clusters: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
A4A49_10130 No alias putative wrky transcription factor 33 0.02 Orthogroups_2024-Update
A4A49_10325 No alias putative wrky transcription factor 40 0.04 Orthogroups_2024-Update
A4A49_19554 No alias putative wrky transcription factor 70 0.05 Orthogroups_2024-Update
A4A49_31688 No alias putative wrky transcription factor 65 0.02 Orthogroups_2024-Update
A4A49_40108 No alias putative wrky transcription factor 51 0.03 Orthogroups_2024-Update
AC209050.3_FG003 No alias WRKY DNA-binding protein 40 0.04 Orthogroups_2024-Update
At1g29280 No alias WRKY65 [Source:UniProtKB/TrEMBL;Acc:A0A178W690] 0.02 Orthogroups_2024-Update
At1g68150 No alias WRKY9 [Source:UniProtKB/TrEMBL;Acc:A0A178WJS2] 0.02 Orthogroups_2024-Update
At1g80840 No alias Probable WRKY transcription factor 40... 0.03 Orthogroups_2024-Update
At2g38470 No alias WRKY33 [Source:UniProtKB/TrEMBL;Acc:A0A178VLS4] 0.03 Orthogroups_2024-Update
At2g40750 No alias Probable WRKY transcription factor 54... 0.04 Orthogroups_2024-Update
At3g56400 No alias Probable WRKY transcription factor 70... 0.03 Orthogroups_2024-Update
At5g22570 No alias Probable WRKY transcription factor 38... 0.03 Orthogroups_2024-Update
Bradi1g47690 No alias WRKY family transcription factor family protein 0.03 Orthogroups_2024-Update
Bradi1g63910 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Bradi2g00280 No alias WRKY DNA-binding protein 26 0.05 Orthogroups_2024-Update
Bradi2g08620 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Bradi2g11170 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Bradi2g33540 No alias WRKY DNA-binding protein 50 0.02 Orthogroups_2024-Update
Bradi2g42023 No alias WRKY DNA-binding protein 50 0.03 Orthogroups_2024-Update
Bradi4g01950 No alias WRKY DNA-binding protein 33 0.04 Orthogroups_2024-Update
Bradi4g19060 No alias WRKY DNA-binding protein 75 0.03 Orthogroups_2024-Update
Bradi4g28280 No alias WRKY DNA-binding protein 46 0.03 Orthogroups_2024-Update
Bradi4g30368 No alias WRKY DNA-binding protein 40 0.03 Orthogroups_2024-Update
Bradi4g45290 No alias WRKY family transcription factor family protein 0.04 Orthogroups_2024-Update
Brara.A01386.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Brara.D01806.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Brara.E00682.1 No alias transcription factor *(WRKY33) & WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Brara.E03626.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I04309.1 No alias WRKY-type transcription factor & component *(MED19) of... 0.03 Orthogroups_2024-Update
GRMZM2G038158 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G111711 No alias WRKY DNA-binding protein 40 0.06 Orthogroups_2024-Update
GRMZM2G156529 No alias WRKY family transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G169966 No alias WRKY DNA-binding protein 33 0.03 Orthogroups_2024-Update
GRMZM2G411766 No alias WRKY family transcription factor 0.04 Orthogroups_2024-Update
GRMZM5G863420 No alias WRKY DNA-binding protein 51 0.04 Orthogroups_2024-Update
Glyma.01G224800 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Glyma.02G010900 No alias WRKY DNA-binding protein 23 0.03 Orthogroups_2024-Update
Glyma.02G232600 No alias WRKY DNA-binding protein 33 0.03 Orthogroups_2024-Update
Glyma.04G054200 No alias WRKY DNA-binding protein 50 0.03 Orthogroups_2024-Update
Glyma.04G223300 No alias WRKY DNA-binding protein 70 0.03 Orthogroups_2024-Update
Glyma.05G127600 No alias WRKY DNA-binding protein 28 0.04 Orthogroups_2024-Update
Glyma.05G211900 No alias WRKY family transcription factor 0.02 Orthogroups_2024-Update
Glyma.06G054500 No alias WRKY DNA-binding protein 50 0.03 Orthogroups_2024-Update
Glyma.09G005700 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Glyma.14G200200 No alias WRKY DNA-binding protein 33 0.04 Orthogroups_2024-Update
Glyma.16G176700 No alias WRKY family transcription factor 0.02 Orthogroups_2024-Update
Glyma.17G097900 No alias WRKY DNA-binding protein 72 0.03 Orthogroups_2024-Update
Glyma.17G222300 No alias WRKY DNA-binding protein 40 0.03 Orthogroups_2024-Update
Glyma.18G056600 No alias WRKY DNA-binding protein 33 0.02 Orthogroups_2024-Update
Glyma.18G208800 No alias WRKY DNA-binding protein 33 0.05 Orthogroups_2024-Update
Glyma.18G242000 No alias WRKY DNA-binding protein 2 0.04 Orthogroups_2024-Update
HORVU0Hr1G001430.1 No alias WRKY-type transcription factor 0.05 Orthogroups_2024-Update
HORVU1Hr1G090130.3 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
HORVU2Hr1G029450.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G029460.1 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
HORVU3Hr1G088200.5 No alias transcription factor *(WRKY33) & WRKY-type transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G049130.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os03g33012 No alias WRKY81, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g16510 No alias WRKY74, expressed 0.02 Orthogroups_2024-Update
MA_114377g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_179641g0010 No alias (at1g29860 : 118.0) member of WRKY Transcription Factor;... 0.02 Orthogroups_2024-Update
MA_23415g0010 No alias (at5g26170 : 117.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
MA_496691g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_7513437g0010 No alias (at5g26170 : 113.0) member of WRKY Transcription Factor;... 0.02 Orthogroups_2024-Update
MA_934202g0010 No alias (at1g62300 : 149.0) Encodes a transcription factor... 0.03 Orthogroups_2024-Update
MA_93790g0010 No alias (at1g29860 : 110.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
Mp8g10640.1 No alias transcription factor (WRKY) 0.02 Orthogroups_2024-Update
PSME_00008606-RA No alias (at5g56270 : 338.0) WRKY transcription factor 2; WRKY... 0.03 Orthogroups_2024-Update
PSME_00010717-RA No alias (at4g22070 : 177.0) member of WRKY Transcription Factor;... 0.02 Orthogroups_2024-Update
PSME_00013774-RA No alias (at1g62300 : 180.0) Encodes a transcription factor... 0.02 Orthogroups_2024-Update
PSME_00032678-RA No alias (at1g13960 : 312.0) Encodes WRKY DNA-binding protein 4... 0.02 Orthogroups_2024-Update
PSME_00033789-RA No alias (at2g38470 : 152.0) Member of the plant WRKY... 0.02 Orthogroups_2024-Update
PSME_00036209-RA No alias (at4g01720 : 157.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
PSME_00036210-RA No alias (at1g62300 : 137.0) Encodes a transcription factor... 0.03 Orthogroups_2024-Update
PSME_00037224-RA No alias (at2g38470 : 152.0) Member of the plant WRKY... 0.02 Orthogroups_2024-Update
PSME_00043147-RA No alias (at4g22070 : 278.0) member of WRKY Transcription Factor;... 0.04 Orthogroups_2024-Update
PSME_00048777-RA No alias (at4g23810 : 118.0) member of WRKY Transcription Factor;... 0.04 Orthogroups_2024-Update
PSME_00051212-RA No alias (at4g11070 : 110.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
Potri.001G044500 No alias WRKY DNA-binding protein 40 0.04 Orthogroups_2024-Update
Potri.001G352400 No alias WRKY DNA-binding protein 28 0.05 Orthogroups_2024-Update
Potri.001G472800 No alias WRKY DNA-binding protein 2 0.03 Orthogroups_2024-Update
Potri.004G007500 No alias WRKY family transcription factor 0.04 Orthogroups_2024-Update
Potri.005G085200 No alias WRKY DNA-binding protein 51 0.03 Orthogroups_2024-Update
Potri.005G203200 No alias WRKY DNA-binding protein 28 0.04 Orthogroups_2024-Update
Potri.006G105300 No alias WRKY DNA-binding protein 33 0.04 Orthogroups_2024-Update
Potri.006G224100 No alias WRKY DNA-binding protein 50 0.03 Orthogroups_2024-Update
Potri.008G103300 No alias WRKY DNA-binding protein 48 0.02 Orthogroups_2024-Update
Potri.011G007800 No alias WRKY family transcription factor 0.04 Orthogroups_2024-Update
Potri.011G070100 No alias WRKY DNA-binding protein 65 0.03 Orthogroups_2024-Update
Potri.013G090300 No alias WRKY DNA-binding protein 70 0.02 Orthogroups_2024-Update
Potri.013G153400 No alias WRKY DNA-binding protein 33 0.04 Orthogroups_2024-Update
Potri.014G090300 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Potri.014G111900 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Potri.015G099200 No alias WRKY DNA-binding protein 75 0.03 Orthogroups_2024-Update
Potri.016G128300 No alias WRKY DNA-binding protein 33 0.04 Orthogroups_2024-Update
Potri.017G079500 No alias WRKY DNA-binding protein 72 0.03 Orthogroups_2024-Update
Pp1s35_336V6 No alias wrky transcription 0.02 Orthogroups_2024-Update
Seita.1G062100.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.2G248500.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.3G108500.1 No alias WRKY-type transcription factor 0.05 Orthogroups_2024-Update
Seita.3G164900.1 No alias WRKY-type transcription factor 0.05 Orthogroups_2024-Update
Seita.3G170400.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.3G206900.1 No alias transcription factor *(WRKY33) & WRKY-type transcription factor 0.05 Orthogroups_2024-Update
Seita.3G287200.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.4G197100.1 No alias WRKY-type transcription factor 0.05 Orthogroups_2024-Update
Seita.5G001000.1 No alias WRKY-type transcription factor 0.06 Orthogroups_2024-Update
Seita.5G032600.1 No alias WRKY-type transcription factor 0.06 Orthogroups_2024-Update
Seita.5G261700.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.5G306000.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.8G123100.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G421700.1 No alias WRKY-type transcription factor 0.05 Orthogroups_2024-Update
Sobic.003G242800.2 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G341100.1 No alias transcription factor *(WRKY33) & WRKY-type transcription factor 0.05 Orthogroups_2024-Update
Sobic.005G117400.2 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G100500.1 No alias transcription factor *(WRKY33) & WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G238200.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G209100.1 No alias WRKY-type transcription factor 0.05 Orthogroups_2024-Update
Solyc01g079260 No alias WRKY transcription factor 23 0.03 Orthogroups_2024-Update
Solyc01g095630 No alias WRKY transcription factor 41 0.04 Orthogroups_2024-Update
Solyc03g095770 No alias WRKY transcription factor 80 0.03 Orthogroups_2024-Update
Solyc04g051690 No alias WRKY transcription factor 51 0.03 Orthogroups_2024-Update
Solyc09g014990 No alias WRKY transcription factor 33 0.04 Orthogroups_2024-Update
Sopen01g047060 No alias WRKY DNA -binding domain 0.03 Orthogroups_2024-Update
Sopen03g035820 No alias WRKY DNA -binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
MF GO:0043565 sequence-specific DNA binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0004725 protein tyrosine phosphatase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006470 protein dephosphorylation IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR003657 WRKY_dom 126 186
No external refs found!