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  5. Sobic.003G014700.1

Sobic.003G014700.1


Description : Unknown function


Gene families : OG_42_0009398 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009398_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G014700.1
Cluster HCAA Clusters: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
Sopen02g015760 No alias PPR repeat family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 392 439
IPR002885 Pentatricopeptide_repeat 493 539
IPR002885 Pentatricopeptide_repeat 162 187
IPR002885 Pentatricopeptide_repeat 292 322
IPR002885 Pentatricopeptide_repeat 190 217
IPR002885 Pentatricopeptide_repeat 264 290
No external refs found!