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  5. Sobic.003G083200.1

Sobic.003G083200.1


Description : regulatory protein *(CBP60) of systemic acquired resistance


Gene families : OG_42_0000455 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000455_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G083200.1
Cluster HCAA Clusters: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
166784 No alias Calmodulin-binding protein 0.03 Orthogroups_2024-Update
A4A49_43559 No alias protein sar deficient 1 0.04 Orthogroups_2024-Update
Bradi2g02310 No alias Calmodulin-binding protein 0.04 Orthogroups_2024-Update
Brara.A00657.1 No alias regulatory protein *(CBP60) of systemic acquired resistance 0.05 Orthogroups_2024-Update
Brara.A01574.1 No alias regulatory protein *(CBP60) of systemic acquired resistance 0.02 Orthogroups_2024-Update
Brara.I00486.1 No alias regulatory protein *(CBP60) of systemic acquired resistance 0.03 Orthogroups_2024-Update
GRMZM2G451882 No alias Calmodulin-binding protein 0.05 Orthogroups_2024-Update
HORVU4Hr1G054630.12 No alias regulatory protein *(CBP60) of systemic acquired resistance 0.02 Orthogroups_2024-Update
LOC_Os02g08120 No alias calmodulin binding protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g35470 No alias calmodulin binding protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os03g18960 No alias calmodulin binding protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_23963g0010 No alias (at5g57580 : 379.0) Calmodulin-binding protein; CONTAINS... 0.05 Orthogroups_2024-Update
PSME_00038372-RA No alias (at5g57580 : 467.0) Calmodulin-binding protein; CONTAINS... 0.06 Orthogroups_2024-Update
PSME_00038778-RA No alias (at4g25800 : 423.0) Calmodulin-binding protein;... 0.04 Orthogroups_2024-Update
Potri.012G054900 No alias Calmodulin binding protein-like 0.04 Orthogroups_2024-Update
Potri.013G010700 No alias Calmodulin-binding protein 0.03 Orthogroups_2024-Update
Potri.015G045300 No alias Calmodulin binding protein-like 0.04 Orthogroups_2024-Update
Potri.018G095300 No alias Calmodulin-binding protein 0.04 Orthogroups_2024-Update
Seita.7G110800.1 No alias regulatory protein *(CBP60) of systemic acquired resistance 0.03 Orthogroups_2024-Update
Sobic.001G031600.1 No alias regulatory protein *(CBP60) of systemic acquired resistance 0.03 Orthogroups_2024-Update
Sobic.004G063100.2 No alias regulatory protein *(CBP60) of systemic acquired resistance 0.03 Orthogroups_2024-Update
Solyc07g006830 No alias Calmodulin-binding protein (AHRD V3.3 *** P93370_TOBAC) 0.03 Orthogroups_2024-Update
Solyc12g036390 No alias Calmodulin binding protein-like, putative (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Sopen02g023850 No alias Calmodulin binding protein-like 0.02 Orthogroups_2024-Update
Sopen07g002930 No alias Calmodulin binding protein-like 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!