At3g52160

Description : 3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VHW8]

Gene families : OG_42_0000099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At3g52160
Cluster	HCCA clusters: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
A4A49_32913	No alias	3-ketoacyl-coa synthase 1	0.04	Orthogroups_2024-Update
Bradi1g36847	No alias	3-ketoacyl-CoA synthase 11	0.03	Orthogroups_2024-Update
Bradi1g55697	No alias	3-ketoacyl-CoA synthase 6	0.03	Orthogroups_2024-Update
Bradi1g68430	No alias	3-ketoacyl-CoA synthase 1	0.05	Orthogroups_2024-Update
Bradi1g69637	No alias	3-ketoacyl-CoA synthase 6	0.04	Orthogroups_2024-Update
Bradi1g72560	No alias	3-ketoacyl-CoA synthase 10	0.03	Orthogroups_2024-Update
Brara.B00145.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
Glyma.10G001800	No alias	3-ketoacyl-CoA synthase 11	0.03	Orthogroups_2024-Update
Glyma.10G274400	No alias	3-ketoacyl-CoA synthase 6	0.03	Orthogroups_2024-Update
Glyma.10G291700	No alias	3-ketoacyl-CoA synthase 19	0.04	Orthogroups_2024-Update
HORVU5Hr1G056870.5	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
LOC_Os10g28060	No alias	3-ketoacyl-CoA synthase, putative, expressed	0.02	Orthogroups_2024-Update
MA_105806g0010	No alias	(at2g26640 : 701.0) Encodes KCS11, a member of the...	0.05	Orthogroups_2024-Update
Potri.009G116700	No alias	3-ketoacyl-CoA synthase 4	0.05	Orthogroups_2024-Update
Potri.013G119600	No alias	3-ketoacyl-CoA synthase 19	0.02	Orthogroups_2024-Update
Seita.3G137500.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
Seita.4G225400.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
evm.model.contig_3397.10	No alias	(at1g19440 : 465.0) Encodes KCS4, a member of the...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	transferase activity, transferring acyl groups	None	Extended
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEA	InterProScan predictions
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	Predicted GO
MF	GO:0004601	peroxidase activity	IEP	Predicted GO
BP	GO:0006413	translational initiation	IEP	Predicted GO
BP	GO:0006950	response to stress	IEP	Predicted GO
BP	GO:0006979	response to oxidative stress	IEP	Predicted GO
BP	GO:0007062	sister chromatid cohesion	IEP	Predicted GO
BP	GO:0007064	mitotic sister chromatid cohesion	IEP	Predicted GO
MF	GO:0016209	antioxidant activity	IEP	Predicted GO
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Predicted GO
BP	GO:0022402	cell cycle process	IEP	Predicted GO
CC	GO:0031390	Ctf18 RFC-like complex	IEP	Predicted GO
BP	GO:0051276	chromosome organization	IEP	Predicted GO
BP	GO:1903047	mitotic cell cycle process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013747	ACP_syn_III_C	358	435
IPR013601	FAE1_typ3_polyketide_synth	85	356

External Links

No external refs found!

At3g52160

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation