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  5. Sobic.003G350000.1

Sobic.003G350000.1


Description : Unknown function


Gene families : OG_42_0008549 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008549_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G350000.1
Cluster HCAA Clusters: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Glyma.16G179400 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
MA_285386g0010 No alias (at2g13600 : 457.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
Seita.5G375400.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 8 37
IPR002885 Pentatricopeptide_repeat 237 284
IPR002885 Pentatricopeptide_repeat 136 184
IPR002885 Pentatricopeptide_repeat 104 133
No external refs found!