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  5. Sobic.003G429800.1

Sobic.003G429800.1


Description : SRS-type transcription factor


Gene families : OG_42_0000655 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.003G429800.1
Cluster HCAA Clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
At5g12330 No alias Lateral root primordium (LRP) protein-related... 0.02 Orthogroups_2024-Update
Potri.004G160600 No alias Lateral root primordium (LRP) protein-related 0.02 Orthogroups_2024-Update
Pp1s373_11V6 No alias Putative zinc finger protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!