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  5. Sobic.004G027800.2

Sobic.004G027800.2


Description : EC_3.2 glycosylase & BZR-type transcription factor


Gene families : OG_42_0000277 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000277_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G027800.2
Cluster HCAA Clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
A4A49_35845 No alias beta-amylase 1, chloroplastic 0.03 Orthogroups_2024-Update
At4g15210 No alias Beta-amylase 5 [Source:UniProtKB/Swiss-Prot;Acc:P25853] 0.03 Orthogroups_2024-Update
At5g18670 No alias Inactive beta-amylase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYW2] 0.03 Orthogroups_2024-Update
Brara.A01833.1 No alias beta amylase & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
GRMZM2G007939 No alias chloroplast beta-amylase 0.03 Orthogroups_2024-Update
GRMZM2G058310 No alias beta-amylase 5 0.03 Orthogroups_2024-Update
GRMZM2G077202 No alias chloroplast beta-amylase 0.03 Orthogroups_2024-Update
GRMZM2G175218 No alias beta-amylase 1 0.03 Orthogroups_2024-Update
Glyma.01G151800 No alias beta-amylase 2 0.02 Orthogroups_2024-Update
Glyma.09G168300 No alias beta-amylase 1 0.03 Orthogroups_2024-Update
Glyma.12G197100 No alias beta-amylase 6 0.04 Orthogroups_2024-Update
Glyma.16G217900 No alias beta-amylase 1 0.03 Orthogroups_2024-Update
Glyma.17G150100 No alias chloroplast beta-amylase 0.03 Orthogroups_2024-Update
HORVU1Hr1G038920.3 No alias beta amylase & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
MA_10432035g0010 No alias (at3g23920 : 650.0) Encodes a chloroplast beta-amylase.... 0.04 Orthogroups_2024-Update
Potri.001G087600 No alias beta-amylase 1 0.03 Orthogroups_2024-Update
Sobic.002G136200.2 No alias beta amylase & EC_3.2 glycosylase & BZR-type transcription factor 0.03 Orthogroups_2024-Update
Sopen01g029610 No alias Glycosyl hydrolase family 14 0.02 Orthogroups_2024-Update
Sopen08g003080 No alias Glycosyl hydrolase family 14 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA 16Dec
MF GO:0016161 beta-amylase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001505 regulation of neurotransmitter levels IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0004484 mRNA guanylyltransferase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006370 7-methylguanosine mRNA capping IEP Predicted GO
BP GO:0006544 glycine metabolic process IEP Predicted GO
BP GO:0006546 glycine catabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008192 RNA guanylyltransferase activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009071 serine family amino acid catabolic process IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0017007 protein-bilin linkage IEP Predicted GO
BP GO:0017009 protein-phycocyanobilin linkage IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
BP GO:0042133 neurotransmitter metabolic process IEP Predicted GO
BP GO:0042135 neurotransmitter catabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0070568 guanylyltransferase activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 299 671
IPR008540 BES1_N 106 256
No external refs found!