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  5. Sobic.004G168500.1

Sobic.004G168500.1


Description : typical 2-Cys peroxiredoxin *(2-CysPrx) & EC_1.11 oxidoreductase acting on peroxide as acceptor


Gene families : OG_42_0003410 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003410_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G168500.1
Cluster HCAA Clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Bradi3g45140 No alias 2-cysteine peroxiredoxin B 0.06 Orthogroups_2024-Update
Bradi5g09650 No alias 2-cysteine peroxiredoxin B 0.06 Orthogroups_2024-Update
Brara.E02915.1 No alias typical 2-Cys peroxiredoxin *(2-CysPrx) & EC_1.11... 0.02 Orthogroups_2024-Update
Cre06.g257601 No alias 2-cysteine peroxiredoxin B 0.02 Orthogroups_2024-Update
GRMZM2G139680 No alias 2-cysteine peroxiredoxin B 0.06 Orthogroups_2024-Update
Pp1s257_45V6 No alias 2-cys peroxiredoxin bas1 0.02 Orthogroups_2024-Update
Seita.1G184000.1 No alias typical 2-Cys peroxiredoxin *(2-CysPrx) & EC_1.11... 0.03 Orthogroups_2024-Update
Solyc10g082030 No alias 2-Cys peroxiredoxin 1 0.03 Orthogroups_2024-Update
evm.model.contig_2143.4 No alias (q96468|bas1_horvu : 207.0) 2-cys peroxiredoxin BAS1,... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016209 antioxidant activity IEA 16Dec
MF GO:0016491 oxidoreductase activity IEA 16Dec
MF GO:0051920 peroxiredoxin activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003937 IMP cyclohydrolase activity IEP Predicted GO
MF GO:0004109 coproporphyrinogen oxidase activity IEP Predicted GO
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
MF GO:0004817 cysteine-tRNA ligase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006450 regulation of translational fidelity IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
MF GO:0019238 cyclohydrolase activity IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR019479 Peroxiredoxin_C 223 257
IPR000866 AhpC/TSA 69 202
No external refs found!