At3g55450

Description : PBS1-like 1 [Source:UniProtKB/TrEMBL;Acc:F4IWV6]

Gene families : OG_42_0000029 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000029_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At3g55450
Cluster	HCCA clusters: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
A4A49_07641	No alias	putative receptor-like protein kinase	0.05	Orthogroups_2024-Update
At2g28930	No alias	At2g28930 [Source:UniProtKB/TrEMBL;Acc:A1L4W8]	0.03	Orthogroups_2024-Update
Bradi3g01690	No alias	Protein kinase superfamily protein	0.02	Orthogroups_2024-Update
Bradi4g31430	No alias	Protein kinase superfamily protein	0.02	Orthogroups_2024-Update
Brara.D00396.1	No alias	RLCK-VIIa receptor-like protein kinase & EC_2.7...	0.07	Orthogroups_2024-Update
Brara.G00457.1	No alias	protein kinase *(RIPK) targeted to RIN4 & RLCK-VIIa...	0.06	Orthogroups_2024-Update
Brara.K00280.1	No alias	RLCK-VIIa receptor-like protein kinase & EC_2.7...	0.05	Orthogroups_2024-Update
GRMZM2G076423	No alias	Protein kinase superfamily protein	0.04	Orthogroups_2024-Update
GRMZM2G147373	No alias	Protein kinase superfamily protein	0.03	Orthogroups_2024-Update
Glyma.01G098400	No alias	protein kinase 1B	0.03	Orthogroups_2024-Update
Glyma.19G019900	No alias	Protein kinase superfamily protein	0.05	Orthogroups_2024-Update
LOC_Os02g53750	No alias	tyrosine protein kinase domain containing protein,...	0.03	Orthogroups_2024-Update
LOC_Os03g07430	No alias	protein kinase domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os03g29410	No alias	tyrosine protein kinase domain containing protein,...	0.02	Orthogroups_2024-Update
LOC_Os06g07230	No alias	tyrosine protein kinase domain containing protein,...	0.03	Orthogroups_2024-Update
PSME_00005476-RA	No alias	(at2g28930 : 486.0) protein kinase 1B (PK1B); FUNCTIONS...	0.02	Orthogroups_2024-Update
Seita.1G368600.1	No alias	protein kinase *(PCRK) & RLCK-VIIa receptor-like protein...	0.03	Orthogroups_2024-Update
Seita.4G279900.1	No alias	RLCK-VIIa receptor-like protein kinase & EC_2.7...	0.03	Orthogroups_2024-Update
Sobic.001G236200.2	No alias	RLCK-VIIa receptor-like protein kinase & protein kinase...	0.04	Orthogroups_2024-Update
Sobic.001G253700.1	No alias	RLCK-VIIa receptor-like protein kinase & EC_2.7...	0.03	Orthogroups_2024-Update
Sobic.004G014000.1	No alias	RLCK-VIIa receptor-like protein kinase & EC_2.7...	0.02	Orthogroups_2024-Update
Sobic.005G017000.1	No alias	RLCK-VIIa receptor-like protein kinase & EC_2.7...	0.03	Orthogroups_2024-Update
Sobic.009G255000.3	No alias	RLCK-VIIa receptor-like protein kinase & EC_2.7...	0.02	Orthogroups_2024-Update
Sobic.010G054900.1	No alias	RLCK-VIIa receptor-like protein kinase & EC_2.7...	0.02	Orthogroups_2024-Update
Sobic.010G274900.1	No alias	RLCK-VIIa receptor-like protein kinase & EC_2.7...	0.03	Orthogroups_2024-Update
Solyc01g112220	No alias	Kinase family protein (AHRD V3.3 *** U5GGQ9_POPTR)	0.03	Orthogroups_2024-Update
Solyc05g007140	No alias	Protein kinase (AHRD V3.3 *** Q2HTW4_MEDTR)	0.03	Orthogroups_2024-Update
Sopen01g035530	No alias	Protein tyrosine kinase	0.02	Orthogroups_2024-Update
Sopen03g006000	No alias	Protein tyrosine kinase	0.02	Orthogroups_2024-Update
Sopen07g003860	No alias	Protein tyrosine kinase	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004133	glycogen debranching enzyme activity	IEP	Predicted GO
MF	GO:0004134	4-alpha-glucanotransferase activity	IEP	Predicted GO
MF	GO:0004180	carboxypeptidase activity	IEP	Predicted GO
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Predicted GO
MF	GO:0004359	glutaminase activity	IEP	Predicted GO
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predicted GO
BP	GO:0006732	coenzyme metabolic process	IEP	Predicted GO
BP	GO:0006766	vitamin metabolic process	IEP	Predicted GO
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Predicted GO
BP	GO:0006771	riboflavin metabolic process	IEP	Predicted GO
MF	GO:0008131	primary amine oxidase activity	IEP	Predicted GO
MF	GO:0008236	serine-type peptidase activity	IEP	Predicted GO
MF	GO:0008238	exopeptidase activity	IEP	Predicted GO
MF	GO:0008686	3,4-dihydroxy-2-butanone-4-phosphate synthase activity	IEP	Predicted GO
BP	GO:0009108	coenzyme biosynthetic process	IEP	Predicted GO
BP	GO:0009110	vitamin biosynthetic process	IEP	Predicted GO
BP	GO:0009231	riboflavin biosynthetic process	IEP	Predicted GO
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Predicted GO
BP	GO:0017144	drug metabolic process	IEP	Predicted GO
MF	GO:0017171	serine hydrolase activity	IEP	Predicted GO
BP	GO:0019725	cellular homeostasis	IEP	Predicted GO
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Predicted GO
BP	GO:0042592	homeostatic process	IEP	Predicted GO
BP	GO:0042726	flavin-containing compound metabolic process	IEP	Predicted GO
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0042816	vitamin B6 metabolic process	IEP	Predicted GO
BP	GO:0042819	vitamin B6 biosynthetic process	IEP	Predicted GO
BP	GO:0042822	pyridoxal phosphate metabolic process	IEP	Predicted GO
BP	GO:0042823	pyridoxal phosphate biosynthetic process	IEP	Predicted GO
BP	GO:0044283	small molecule biosynthetic process	IEP	Predicted GO
BP	GO:0045454	cell redox homeostasis	IEP	Predicted GO
BP	GO:0046184	aldehyde biosynthetic process	IEP	Predicted GO
BP	GO:0065008	regulation of biological quality	IEP	Predicted GO
MF	GO:0070008	serine-type exopeptidase activity	IEP	Predicted GO
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Predicted GO
MF	GO:2001070	starch binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	64	344

External Links

No external refs found!

At3g55450

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation