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  5. Sobic.004G195800.1

Sobic.004G195800.1


Description : Unknown function


Gene families : OG_42_0000681 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000681_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G195800.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
A4A49_21027 No alias hypothetical protein 0.04 Orthogroups_2024-Update
At5g48290 No alias Heavy metal transport/detoxification superfamily protein... 0.04 Orthogroups_2024-Update
Bradi3g47170 No alias Copper transport protein family 0.02 Orthogroups_2024-Update
Brara.E03189.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G119975 No alias Heavy metal transport/detoxification superfamily protein 0.06 Orthogroups_2024-Update
GRMZM2G160710 No alias Heavy metal transport/detoxification superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G169726 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
GRMZM5G882364 No alias Copper transport protein family 0.03 Orthogroups_2024-Update
HORVU2Hr1G081590.2 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os02g37160 No alias heavy metal transport/detoxification protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g37300 No alias heavy metal associated domain containing protein, expressed 0.04 Orthogroups_2024-Update
Potri.001G378700 No alias Copper transport protein family 0.03 Orthogroups_2024-Update
Potri.014G171300 No alias Heavy metal transport/detoxification superfamily protein 0.04 Orthogroups_2024-Update
Seita.1G212200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G130800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G130900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.7G131400.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.7G131700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G114200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc07g056200 No alias Heavy metal transport/detoxification superfamily... 0.03 Orthogroups_2024-Update
Sopen07g029540 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!