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  5. Sobic.004G248600.1

Sobic.004G248600.1


Description : component *(MED23) of tail module of MEDIATOR transcription co-activator complex


Gene families : OG_42_0005008 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G248600.1
Cluster HCAA Clusters: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
76173 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi3g56910 No alias Function unknown 0.05 Orthogroups_2024-Update
Kfl00804_0030 kfl00804_0030_v1.1 (at1g23230 : 641.0) FUNCTIONS IN: molecular_function... 0.02 Orthogroups_2024-Update
Mp1g05140.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.04 Orthogroups_2024-Update
Seita.1G309700.1 No alias component *(MED23) of tail module of MEDIATOR... 0.06 Orthogroups_2024-Update
Solyc05g016440 No alias Mediator of RNA polymerase II transcription subunit 23... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003689 DNA clamp loader activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005663 DNA replication factor C complex IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
MF GO:0033170 protein-DNA loading ATPase activity IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1902554 serine/threonine protein kinase complex IEP Predicted GO
CC GO:1902911 protein kinase complex IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
CC GO:1990316 Atg1/ULK1 kinase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR021629 Mediator_Med23 504 1232
No external refs found!