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Description : Protein yippee-like (AHRD V3.3 *** YIPL_SOLTU)
Gene families : OG_42_0000388 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000388_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc03g096080 | |
| Cluster | HCCA clusters: Cluster_116 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Brara.A01754.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.J00882.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Cre07.g355500 | No alias | Yippee family putative zinc-binding protein | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000175 | 3'-5'-exoribonuclease activity | IEP | Predicted GO |
| BP | GO:0000289 | nuclear-transcribed mRNA poly(A) tail shortening | IEP | Predicted GO |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Predicted GO |
| MF | GO:0004392 | heme oxygenase (decyclizing) activity | IEP | Predicted GO |
| MF | GO:0004518 | nuclease activity | IEP | Predicted GO |
| MF | GO:0004527 | exonuclease activity | IEP | Predicted GO |
| MF | GO:0004532 | exoribonuclease activity | IEP | Predicted GO |
| MF | GO:0004535 | poly(A)-specific ribonuclease activity | IEP | Predicted GO |
| MF | GO:0004888 | transmembrane signaling receptor activity | IEP | Predicted GO |
| MF | GO:0004970 | ionotropic glutamate receptor activity | IEP | Predicted GO |
| MF | GO:0005230 | extracellular ligand-gated ion channel activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0005515 | protein binding | IEP | Predicted GO |
| BP | GO:0006401 | RNA catabolic process | IEP | Predicted GO |
| BP | GO:0006402 | mRNA catabolic process | IEP | Predicted GO |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006788 | heme oxidation | IEP | Predicted GO |
| MF | GO:0008066 | glutamate receptor activity | IEP | Predicted GO |
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Predicted GO |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Predicted GO |
| MF | GO:0016796 | exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0016896 | exoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predicted GO |
| CC | GO:0019867 | outer membrane | IEP | Predicted GO |
| MF | GO:0022824 | transmitter-gated ion channel activity | IEP | Predicted GO |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Predicted GO |
| MF | GO:0022835 | transmitter-gated channel activity | IEP | Predicted GO |
| MF | GO:0030594 | neurotransmitter receptor activity | IEP | Predicted GO |
| MF | GO:0038023 | signaling receptor activity | IEP | Predicted GO |
| BP | GO:0042168 | heme metabolic process | IEP | Predicted GO |
| BP | GO:0042440 | pigment metabolic process | IEP | Predicted GO |
| MF | GO:0043169 | cation binding | IEP | Predicted GO |
| MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| MF | GO:0060089 | molecular transducer activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004910 | Yippee/Mis18/Cereblon | 11 | 67 |
| No external refs found! |